Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 351 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

 Score =  239 bits (609), Expect = 1e-67
 Identities = 147/351 (41%), Positives = 196/351 (55%), Gaps = 21/351 (5%)

Query: 1   MARLSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTI 60
           M+ + L  + +++ A TAVD VSLT+  G  +ALLGPSGCGKTT LR++ GF     G I
Sbjct: 1   MSDVVLQSIVKRYDAMTAVDHVSLTISEGELVALLGPSGCGKTTTLRMVGGFIPVTEGRI 60

Query: 61  TLGDGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQR 120
            +G      D   +PP +R +G  FQ+YAL+PHM+VAENVA+ L++R + +AE    V+ 
Sbjct: 61  LVG----GRDLTHLPPNKRNMGFGFQNYALFPHMSVAENVAFGLEMRKLPKAEIMAKVKT 116

Query: 121 CLDQVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREF 180
            LD+V L  L  RLP  LSGGQ+QRVALAR L + P +LLLDEPL+NLDA LR  M+ E 
Sbjct: 117 ALDRVKLSHLAERLPKQLSGGQQQRVALARALVIEPDVLLLDEPLSNLDAQLRHEMKTEI 176

Query: 181 RAFHAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGR 240
           R    + G T ++VTHDQ EALS+AD+V +M  G ++Q  +P +L+ RPA+   A F+G 
Sbjct: 177 RTLQQQLGITTIFVTHDQDEALSVADRVVLMRAGKIEQQGSPDDLFGRPASRFAAEFMGV 236

Query: 241 GMVLPAHL---GRATAGGGAVAATLFGQAISVDSPAHPAGPARLCLRSEDLSLTGPDTPE 297
             +LP  L   GR    GG               P    G   L LR E L+L   +   
Sbjct: 237 TNLLPGELAGVGRFRLAGGEEVRV---------HPVGVGGDLSLALRPERLALDADERDH 287

Query: 298 GLGCTVCD-TVFHGDHFALDVRPQAAPETVLRVRLTQAPPPQGSPVTLRIG 347
                V D   + G    +D R   A   VL  R  +  P  G P  L+ G
Sbjct: 288 NALPAVVDLATYRG--LVIDYRVATASGLVLIAR--RPSPAVGGPAPLKPG 334