Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 385 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

 Score =  241 bits (615), Expect = 2e-68
 Identities = 148/334 (44%), Positives = 199/334 (59%), Gaps = 10/334 (2%)

Query: 1   MARLSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTI 60
           +A + +DGV+++FG  TA+    L +  G F+ LLGPSGCGKTTLL LIAGF   DGG I
Sbjct: 27  VAGVQIDGVTKRFGDATALHEAWLKIADGEFMTLLGPSGCGKTTLLNLIAGFLEADGGEI 86

Query: 61  TLGDGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQR 120
            +G G + ++TA   P  R +G+VFQ+YAL+PHM VA+NV Y L++RGVA++E    V  
Sbjct: 87  FVG-GRLMTETA---PYDREIGVVFQNYALFPHMNVAKNVGYGLRMRGVAKSEIETRVAE 142

Query: 121 CLDQVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREF 180
            L  V L   G R P  LSGGQ+QRVALAR L + P +LLLDEP + LD +LR +MQ E 
Sbjct: 143 ALALVKLDGFGERKPRQLSGGQQQRVALARALVIRPKVLLLDEPFSALDKNLRGAMQVEL 202

Query: 181 RAFHAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGR 240
           +    + G T ++VTHDQ+EALS++D++AVM  G ++QV TP E+YRRP    VA FVG 
Sbjct: 203 KEIQRRLGVTTIFVTHDQSEALSMSDRIAVMSQGRIRQVGTPDEIYRRPLDPFVASFVGD 262

Query: 241 GMVLPAHLGRATAGGGAVAATLFGQAISVDS--PAHPAGPARLCLRSEDLSLTGPDTPEG 298
             VLP  L R       V       ++S D+     P     L +R + + +      EG
Sbjct: 263 VNVLPGRLERRIGETATVLIAEGRLSVSADTLEGIAPGAAVDLFVRPDAVRIA---EGEG 319

Query: 299 L-GCTVCDTVFHGDHFALDVRPQAAPETVLRVRL 331
           L   TV   V+ G H  + V   AA    + VR+
Sbjct: 320 LVSGTVATHVYQGSHVDVLVDVAAARGGRVTVRV 353