Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 370 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  229 bits (583), Expect = 1e-64
 Identities = 131/314 (41%), Positives = 179/314 (57%), Gaps = 10/314 (3%)

Query: 4   LSLDGVSRQF-GARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITL 62
           +S  GV + + G    V  ++L +  G FL LLGPSG GKTT L ++AGF+ P  G I L
Sbjct: 11  VSFRGVQKSYDGENLIVKDLNLEIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEIQL 70

Query: 63  GDGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCL 122
               + +    VPP +R +GMVFQ+YAL+PHMTVAEN+A+ L +R +++ + +  V+R L
Sbjct: 71  AGRSINN----VPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRALSKTDISERVKRVL 126

Query: 123 DQVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRA 182
             V L     R PA LSGGQ+QRVALAR L   P ++L+DEPL  LD  LRE MQ E + 
Sbjct: 127 SMVQLDAFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKH 186

Query: 183 FHAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGM 242
            H + G T+VYVTHDQ EAL+++D+VAV   G +QQ+A P  LY  P    VA F+G   
Sbjct: 187 LHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAAPRTLYEEPKNTFVANFIGENN 246

Query: 243 VLPAHLGRATAGGGAVAATLFGQAIS--VDSPAHPAGPARLCLRSEDLSLTGPDTP--EG 298
            L   L  + +G   V     G+ +     +     GP  L +R E +SL G        
Sbjct: 247 RLNGRL-HSHSGERCVVELARGEKVEALAVNVGQVGGPVTLSVRPERVSLNGSSESCVNR 305

Query: 299 LGCTVCDTVFHGDH 312
               V + ++ GDH
Sbjct: 306 FSGRVAEFIYLGDH 319