Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 342 a.a., spermidine/putrescine ABC transporter ATPase from Pseudomonas simiae WCS417

 Score =  235 bits (600), Expect = 1e-66
 Identities = 150/347 (43%), Positives = 192/347 (55%), Gaps = 25/347 (7%)

Query: 1   MARLSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTI 60
           MA L L+ +S+++GA  AV    L +E G F++LLGPSGCGKTT L++IAGF    GG I
Sbjct: 1   MAFLQLNALSKRYGAVDAVVATDLAVEKGEFVSLLGPSGCGKTTTLQMIAGFVDVSGGQI 60

Query: 61  TLGDGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQR 120
            L DG    D     P  RG+G+VFQSYAL+PHM+V +NVA+ LK+R V  AE A  V+ 
Sbjct: 61  LL-DG---RDITHAKPASRGLGVVFQSYALFPHMSVRDNVAFGLKMRKVPAAEIASKVKT 116

Query: 121 CLDQVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREF 180
            L+ V L     R P  LSGGQRQRVALAR L + P +LLLDEPL+NLDA+LRE MQ E 
Sbjct: 117 VLELVRLAPHADRYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDANLREEMQFEI 176

Query: 181 RAFHAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGR 240
           R      G T + VTHDQAEALS++D+V VM  G + Q+  P +LY  P T  ++ FVG+
Sbjct: 177 RRIQCAVGITTLMVTHDQAEALSISDRVVVMQAGRVTQIDAPYKLYEHPRTRFISDFVGK 236

Query: 241 GMVLPAHLGRATAGGGAVAATLFGQAISVDSP--AHPAGPARLCLRSEDLSLTGPDTPEG 298
             +LP                  G    + SP   H +G   L L      +   D   G
Sbjct: 237 ANLLP------------------GDYDLLGSPQVRHESGDGELTLSLRPEKIQLVDAGSG 278

Query: 299 -LGCTVCDTVFHGDHFALDVRPQAAPETVLRVRLTQAPPPQGSPVTL 344
            L   V D+ F G  +   +       TV+R     AP   G+ V L
Sbjct: 279 RLQGKVLDSYFFGSQWLYRIHTSLGEITVVRSNDGSAPLGYGAAVGL 325