Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 344 a.a., polyamine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  246 bits (628), Expect = 6e-70
 Identities = 129/246 (52%), Positives = 160/246 (65%), Gaps = 4/246 (1%)

Query: 9   VSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITLGDGIVA 68
           VSRQFG   AVDRVS+ ++ G F ++LGPSG GKTT LRLIAGF++P  G+I     I  
Sbjct: 10  VSRQFGEVKAVDRVSIDIQDGEFFSMLGPSGSGKTTCLRLIAGFEQPSAGSIR----IHG 65

Query: 69  SDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCLDQVGLG 128
            + A +PP +R V  VFQ YAL+PHM V +NVAY LK++GV + ER    +  L  V LG
Sbjct: 66  EEAAGLPPYQRDVNTVFQDYALFPHMNVRDNVAYGLKVKGVGKTERMNRAEEALGMVALG 125

Query: 129 TLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRAFHAKTG 188
             G R P  LSGGQRQRVALAR L   P +LLLDEPL  LD  LRE MQ E +    + G
Sbjct: 126 GYGDRKPVQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQSELKKLQRQLG 185

Query: 189 ATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGMVLPAHL 248
            T ++VTHDQ EALS++D+VAV + G ++QV TP  LY +PAT  VA FVG   V+   L
Sbjct: 186 ITFIFVTHDQTEALSMSDRVAVFNKGRIEQVDTPRNLYMKPATSFVAEFVGTSNVIRGEL 245

Query: 249 GRATAG 254
            +   G
Sbjct: 246 AQRLGG 251