Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 359 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  246 bits (629), Expect = 5e-70
 Identities = 128/243 (52%), Positives = 162/243 (66%), Gaps = 4/243 (1%)

Query: 4   LSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITLG 63
           LSL G+ + FGA   +D + L +EPG F+ LLGPSGCGKTTLLR++ G +R D G I LG
Sbjct: 7   LSLRGIGKSFGATRVLDGIDLDIEPGEFVCLLGPSGCGKTTLLRIVCGIERADSGQILLG 66

Query: 64  DGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCLD 123
                 D A +PP  RG G+VFQSYAL+P++T A+N+AY L   G    E A+  +  LD
Sbjct: 67  ----GQDIAGLPPAARGFGVVFQSYALFPNLTAAQNIAYGLHPTGALAREMAKRSREMLD 122

Query: 124 QVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRAF 183
            VGL     + P  LSGGQ+QRVALAR LA NP +LLLDEPL+ LDA +R S++ E RA 
Sbjct: 123 LVGLAAHADKYPVQLSGGQQQRVALARALAPNPRLLLLDEPLSALDAQVRASLRSEIRAL 182

Query: 184 HAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGMV 243
             + G   + VTHDQ EALS+AD+V +M  G ++Q  TP ELYR+P T  VA FVGR  +
Sbjct: 183 QKRLGIVTIMVTHDQEEALSMADRVVLMHNGRIEQAGTPDELYRQPRTRFVAGFVGRMNM 242

Query: 244 LPA 246
           LPA
Sbjct: 243 LPA 245