Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  239 bits (611), Expect = 6e-68
 Identities = 135/305 (44%), Positives = 183/305 (60%), Gaps = 21/305 (6%)

Query: 1   MARLSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTI 60
           M  L+LD + +++    A   VSL++  G F++LLGPSGCGKTT+LR++AG   P GG I
Sbjct: 1   MPALTLDRLEKRYPGHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGRI 60

Query: 61  TLGDGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQR 120
            L DG    D   +P  RR +G+VFQSYAL+PHM+V ENVA+ L+ +G+  +E  + V +
Sbjct: 61  -LVDG---RDITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQ 116

Query: 121 CLDQVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREF 180
            L  V L  LG R+P  LSGGQ+QRVA+AR +A  P+ILL DEPL+NLDA LR+ MQ E 
Sbjct: 117 ALASVRLSALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIEL 176

Query: 181 RAFHAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGR 240
           +    + G T ++VTHDQ EA+S++D+V V+  GV+QQ  TP  +Y RPAT  VA F+GR
Sbjct: 177 KRLQREVGITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFIGR 236

Query: 241 GMVLPAHLGRATAGGGAVAATLFGQAISVDSPAHPAGPAR---------LCLRSEDLSLT 291
              L   + RA     AV           D P  PA  A          + +R ED+   
Sbjct: 237 PNRLTGRVVRANGASAAVQLD--------DGPMLPASAAEGMVQGAAVDVVIRQEDIRFA 288

Query: 292 GPDTP 296
              +P
Sbjct: 289 DAPSP 293