Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 343 a.a., predicted polyamine ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  238 bits (606), Expect = 2e-67
 Identities = 129/249 (51%), Positives = 161/249 (64%), Gaps = 4/249 (1%)

Query: 9   VSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITLGDGIVA 68
           VSR FG   AVD+VS+ +  G F ++LGPSG GKTT LRLIAGF++P  G+I +  G+ A
Sbjct: 10  VSRTFGEVKAVDQVSIDIIDGEFFSMLGPSGSGKTTCLRLIAGFEQPSSGSIRI-QGVEA 68

Query: 69  SDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCLDQVGLG 128
              A +PP +R V  VFQ YAL+PHM V EN+AY LK++GV +AER    +  L  V L 
Sbjct: 69  ---AGLPPYQRDVNTVFQDYALFPHMNVLENIAYGLKVKGVGKAERHSRAEEALAMVALA 125

Query: 129 TLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRAFHAKTG 188
             G R PA LSGGQRQRVALAR L   P +LLLDEPL  LD  LRE MQ E +    + G
Sbjct: 126 GYGARKPAQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQGELKKLQRQLG 185

Query: 189 ATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGMVLPAHL 248
            T ++VTHDQ EALS++D+VAV + G ++QV TP  LY +P+T  VA FVG   V+   L
Sbjct: 186 ITFIFVTHDQTEALSMSDRVAVFNRGRIEQVDTPRNLYMKPSTTFVAEFVGTSNVVRGEL 245

Query: 249 GRATAGGGA 257
                G  A
Sbjct: 246 AMQINGSPA 254