Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 374 a.a., Polyamine ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  223 bits (569), Expect = 5e-63
 Identities = 130/316 (41%), Positives = 178/316 (56%), Gaps = 14/316 (4%)

Query: 4   LSLDGVSRQF-GARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITL 62
           +S  GV + + G    V  ++L +  G FL LLGPSG GKTT L ++AGF+ P  G I L
Sbjct: 15  VSFRGVQKSYDGESLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEIQL 74

Query: 63  GDGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCL 122
           G   + +    VPP +R +GMVFQ+YAL+PHMTVAEN+A+ L +R +++ + +  V+R L
Sbjct: 75  GGRSINN----VPPHKRDIGMVFQNYALFPHMTVAENLAFPLTVRNLSKTDISERVKRVL 130

Query: 123 DQVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRA 182
           + V L     R P  LSGGQ+QRVALAR L   P ++L+DEPL  LD  LRE MQ E + 
Sbjct: 131 NMVQLDAFAKRYPGQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKH 190

Query: 183 FHAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGM 242
            H + G T+VYVTHDQ EAL+++D+VAV   G +QQ+A P  LY  P    VA F+G   
Sbjct: 191 IHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIADPRTLYEEPCNTFVANFIGENN 250

Query: 243 VLPAHLGRATAGGGAVAATLFGQAISVDSPAHPAG----PARLCLRSEDLSLTG--PDTP 296
            +    G   A  G        +   V++ A   G    P  L +R E + L G      
Sbjct: 251 RIS---GTLLASDGKRCQVQLPRGERVEALAVNVGQAGEPVTLSIRPERVRLNGHSESCV 307

Query: 297 EGLGCTVCDTVFHGDH 312
                 V + ++ GDH
Sbjct: 308 NRFSGRVAEFIYLGDH 323