Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 379 a.a., polyamine ABC transporter ATP-binding protein from Magnetospirillum magneticum AMB-1

 Score =  230 bits (586), Expect = 5e-65
 Identities = 137/320 (42%), Positives = 187/320 (58%), Gaps = 10/320 (3%)

Query: 4   LSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITLG 63
           +  +G+S++FG  TAV+ V L +  G F +LLG SGCGKTTLLR++AGF+ P  G I + 
Sbjct: 23  IRFEGISKRFGDFTAVEHVDLAIHKGEFFSLLGASGCGKTTLLRMLAGFEIPTTGRILI- 81

Query: 64  DGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCLD 123
           DG    D   VPP  R V M+FQSYAL+PHM+VA+N+A+ LK  G+A+      V   L+
Sbjct: 82  DG---QDVTEVPPYERPVNMMFQSYALFPHMSVADNIAFGLKQDGLAKPVIKDKVAAALE 138

Query: 124 QVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRAF 183
            V +G   GR P  LSGGQRQRVALARCLA  P ++LLDEPLA LD  LRE+ Q E    
Sbjct: 139 LVQMGRFSGRKPHQLSGGQRQRVALARCLAKEPKVVLLDEPLAALDKKLREATQLELVNI 198

Query: 184 HAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGMV 243
             + G T V VTHDQ EA++++ ++ VM+ G ++QV +P ++Y  P T  VA F+G   +
Sbjct: 199 QDRVGITFVMVTHDQGEAMTMSSRIGVMNAGCIEQVGSPVDIYEYPGTRFVADFIGAANM 258

Query: 244 LPAHLGRATAGGGAVAATLFGQAISV-DSPAHPAG-PARLCLRSEDLSLTGPDTPEGLGC 301
               + R   G  A+A       +SV ++ A  AG P  + +R E + +       GL  
Sbjct: 259 FQGSV-RGGEGALAIACPELEHDLSVTEAGAVAAGTPVTVMVRPEKVMIARDKPASGLNW 317

Query: 302 ---TVCDTVFHGDHFALDVR 318
               V D  + GD     VR
Sbjct: 318 AEGVVSDIAYLGDVSIYHVR 337