Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 337 a.a., Uncharacterized ABC transporter ATP-binding protein YdcT from Escherichia coli ECRC101

 Score =  227 bits (578), Expect = 4e-64
 Identities = 120/251 (47%), Positives = 158/251 (62%), Gaps = 4/251 (1%)

Query: 4   LSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITLG 63
           +  D VSR +G   AVD VS+ ++ G F ++LGPSG GKTT LRLIAGF++  GG I+  
Sbjct: 5   VEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGAIS-- 62

Query: 64  DGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCLD 123
             I     + +PP  R V  VFQ YAL+PHM++ +NVAY L ++GV + +R  + Q  L+
Sbjct: 63  --IFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALE 120

Query: 124 QVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRAF 183
           +V LG +  R P+ LSGGQRQRVA+AR L   P +LLLDEPL  LD  LRE MQ E +  
Sbjct: 121 KVALGFVQQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKL 180

Query: 184 HAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGMV 243
               G T + VTHDQ EALS++D+VAV + G ++QV +P +LY RP T  VA FVG   V
Sbjct: 181 QQSLGITFICVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNV 240

Query: 244 LPAHLGRATAG 254
               +     G
Sbjct: 241 FDGLMAEKLCG 251