Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 371 a.a., Spermidine/putrescine import ATP-binding protein PotA from Azospirillum sp. SherDot2

 Score =  251 bits (640), Expect = 3e-71
 Identities = 146/317 (46%), Positives = 191/317 (60%), Gaps = 9/317 (2%)

Query: 4   LSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITLG 63
           + ++GV+  +G+   +  V+L ++PG F A LGPSGCGKTTLLRLIAGF+    G + +G
Sbjct: 19  VDIEGVNLSYGSNHVLKDVNLAIKPGEFFAFLGPSGCGKTTLLRLIAGFNTAQRGEVRIG 78

Query: 64  DGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCLD 123
                 D + +PP RR VGMVFQSYALWPHMTV  NVA+ L+ R V RAE  R V   L+
Sbjct: 79  ----GRDISTLPPHRRDVGMVFQSYALWPHMTVRRNVAFGLEERRVPRAEIERRVDAALE 134

Query: 124 QVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRAF 183
            VGL  L  R P+ LSGGQ+QRVALAR + + P ILLLDEPL+NLDA LR  M++E  + 
Sbjct: 135 LVGLKHLADRRPSQLSGGQQQRVALARTVVIEPKILLLDEPLSNLDAKLRVQMRQELLSL 194

Query: 184 HAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGMV 243
             K G T ++VTHDQ EA ++ D++AVM+ G +QQV TP +LY  PA   VA F+G   V
Sbjct: 195 QRKLGLTTIFVTHDQEEANTICDRIAVMEDGRVQQVGTPQDLYDHPANLFVAGFLGTANV 254

Query: 244 LPAHLGRATAGGGAVAATLFGQAISVDSPAHPAGP-ARLCLRSEDLSLTGPDTPEGLG-C 301
           L   +    AG  A   T F     V  PA  AG   +L  R ++L++     P   G  
Sbjct: 255 LDGTVRDDGAGSRAFVGTGF---TPVALPAVDAGTGGKLMFRPQNLAIRADGQPPVPGHA 311

Query: 302 TVCDTVFHGDHFALDVR 318
            +  TV H +     +R
Sbjct: 312 RLTGTVRHREFLGASIR 328