Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 341 a.a., spermidine/putrescine ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  224 bits (571), Expect = 3e-63
 Identities = 125/258 (48%), Positives = 159/258 (61%), Gaps = 4/258 (1%)

Query: 4   LSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITLG 63
           LSL+ VS  +G   AV  + L +  G  LALLGPSGCGKTT +R IAG      G I L 
Sbjct: 7   LSLNKVSLAYGNSIAVKDLDLDIRKGELLALLGPSGCGKTTTMRAIAGLMPVASGRIDL- 65

Query: 64  DGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCLD 123
           DG   +D   V   +R VG+VFQSYAL+PH+TV ENVA+ LK++G++       V   L 
Sbjct: 66  DG---ADITRVAANKRAVGLVFQSYALFPHLTVYENVAFGLKLKGMSGKTLDDKVASGLK 122

Query: 124 QVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRAF 183
            VGL     R PA LSGGQ+QRVALAR + M P +LLLDEPL+NLDA LR  M+ E +  
Sbjct: 123 SVGLSNFASRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRTELQRV 182

Query: 184 HAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGMV 243
             +TG TM++VTHDQ EAL+LAD++ VM GG ++Q+ TP E+Y  P +  VA FVG   +
Sbjct: 183 QKETGVTMIFVTHDQIEALALADRIVVMKGGKIEQIGTPEEIYNAPVSSFVADFVGFENI 242

Query: 244 LPAHLGRATAGGGAVAAT 261
                G      G  + T
Sbjct: 243 FALEDGALKTANGKTSLT 260