Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 360 a.a., polyamine ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  230 bits (586), Expect = 5e-65
 Identities = 132/314 (42%), Positives = 186/314 (59%), Gaps = 10/314 (3%)

Query: 4   LSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITL- 62
           L + G+ +Q+G   AV  V+L ++PG F+  LGPSG GK+T L ++AGF++P  G I L 
Sbjct: 6   LQIRGIRKQYGPLVAVQDVNLDVQPGEFMTFLGPSGSGKSTTLYILAGFEQPTSGDILLN 65

Query: 63  GDGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCL 122
           G+ ++++     P  +R +GMVFQ Y L+PH++V EN+A+ LK+R  ++A+    V+  L
Sbjct: 66  GESLLST-----PSHKRNIGMVFQRYTLFPHLSVGENIAFPLKVRRRSKADIDAKVKEML 120

Query: 123 DQVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRA 182
             V L     R PA +SGGQ+QRVALAR LA +P +LL+DEPL+ LD  LRE +Q E R 
Sbjct: 121 RLVRLEGFEDRKPAQMSGGQQQRVALARALAYDPPVLLMDEPLSALDKKLREEIQFEIRR 180

Query: 183 FHAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGM 242
            H +T  T++YVTHDQ EAL L+D++AV   GV+ Q+ T  ELY  P T  VA F+G   
Sbjct: 181 IHQQTEVTILYVTHDQEEALRLSDRIAVFSKGVIDQIGTGPELYAHPTTRFVAEFIGDSD 240

Query: 243 VLPAHLGRATAGGGAVA--ATLFGQAISVDSPAHPAGPARLCLRSEDLSLT--GPDTPEG 298
            +   L  A+ G   V+    +    I +   A P   A L LR E L L+   P    G
Sbjct: 241 FIACDLIAASGGKATVSLGRDIIFDHIPMHGEAAPGKKAALMLRPERLQLSRNRPVASAG 300

Query: 299 LGCTVCDTVFHGDH 312
              TV D  F G++
Sbjct: 301 FQATVSDITFLGNN 314