Pairwise Alignments

Query, 615 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

Subject, 537 a.a., Periplasmic dipeptide transport protein from Xanthobacter sp. DMC5

 Score =  113 bits (283), Expect = 2e-29
 Identities = 113/460 (24%), Positives = 178/460 (38%), Gaps = 52/460 (11%)

Query: 110 VAQTMELAADRSWLIFTLRPEARWSDGQPITAEDVAFSFQILKDKGQPLYNSYYSNVTGV 169
           +A + E +AD + + F LR +  W DG P T+ DVA+S   +  K  P  N+ ++N+T V
Sbjct: 87  LATSWETSADGTVITFRLRNDVTWHDGTPFTSADVAYSLLEVTKKVHPRGNAVFANLTAV 146

Query: 170 EVLDAKRVKFTFSPGENRELPSIVG-QLPVLPKH-YWATRDFAETTLDQPVSAGPYRIAS 227
           +  D       FS        +  G +  +LPKH Y  T         +P+  G +    
Sbjct: 147 DTPDPYTAVLRFSRPSPVVWAAFNGTETQILPKHLYEGTNPLTNPLNGKPIGTGAFVFKE 206

Query: 228 FEPGRQITYERVKDYWAEALPVSKGMNNFDRIRYDYYRDVTVTLEGFKAGAFDFNSEHSA 287
           +  G +I  ER  +YW       KG    DR+ +   RD        + G     +++  
Sbjct: 207 WVKGERIVLERNPNYW------DKGRPYLDRVVFRIIRDPASRAAALETG----EAQYIP 256

Query: 288 KNWATEYKFPAV-SEGHVITEKVPVKGPDREQGFIFNMRRAQFQDPRVREALAYGFDFEW 346
            N         + +   ++ E    +GP     F FN+RR  F D RVR+A A+  + + 
Sbjct: 257 LNPVPLSDVARIKASKDLVVETRGFEGPAPMYFFDFNLRREPFGDIRVRQAFAHALNRKA 316

Query: 347 TNQTLFYGQYTRTRSFFENSELAAVGLPGPEELKILEPLRAQIPPRVFTEEYQPPVTDEA 406
             +T+FYG                          + +P    +P       YQ       
Sbjct: 317 LAETVFYG--------------------------LAKPAAGPVP------SYQTQFFATD 344

Query: 407 KGGLRANLKKALDLMKEAGWTVNAAGKMVNAAGQPFTFEILLRQADVERMVLPMVKNFER 466
                 N+ KA  L+  AG    A G  +     P  +       D  R      +  +R
Sbjct: 345 LPQYDYNIAKAEALLDAAGLKKGADGVRLRIDHIPSAY-----GEDYRRAGEYFKQALKR 399

Query: 467 LGITATVRTVDTPQFISRV-QSFDFDMVSAVWAQSNSPG-NEQRDLWSSTAADIPGTSNL 524
           +G+  T+R  D P +I  V   +DFD  SA ++    P    QR  WS        +SN 
Sbjct: 400 IGVDVTLRNYDLPTYIKVVFTEYDFDTHSAWYSAYPDPQIGVQRRYWSQAIKKGTPSSNA 459

Query: 525 AGLKSPAVDSLIESVIAAPTRADLIARTRALDRVLQWSFP 564
           +G+  P +D++IE +          A  R L R+ Q   P
Sbjct: 460 SGIADPEIDAVIERIQTEGNVEKRNADIRELQRLAQVKLP 499