Pairwise Alignments

Query, 615 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

Subject, 530 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 90.5 bits (223), Expect = 2e-22
 Identities = 112/465 (24%), Positives = 169/465 (36%), Gaps = 57/465 (12%)

Query: 79  TVKGTAAFGIGLTQTTLTVPSADEPSTEYGLVAQTMELAADRSWLIFTLRPEARWSDGQP 138
           T  G A  G  + +  LT     +P     L+A     + D     F LR   +W DG+ 
Sbjct: 54  TAGGNAEIGPKIVEGLLTYDYDLKPKP---LLATAWSQSKDGLQYTFELRKGVKWHDGKD 110

Query: 139 ITAEDVAFSFQILKDKGQPLYNSYYSNVTGVEVLDAKRVKFTFSPGENRELPSIVG-QLP 197
            T+ DVAFS   LK +  P     ++NV  V+  DA       S      L ++   + P
Sbjct: 111 FTSADVAFSILTLK-QVHPRGRGTFANVVDVKTPDANTAVIVLSKPSPFLLTALASTESP 169

Query: 198 VLPKHYWATRDFAETTLDQ-PVSAGPYRIASFEPGRQITYERVKDYWAEALPVSKGMNNF 256
           ++PKH +   D A    +  PV  GP+    +  G  I  ER  +YW +  P        
Sbjct: 170 IVPKHLYEGTDIASNKYNSAPVGTGPFVFKEWVQGSHIILERNPNYWDKPKPY------L 223

Query: 257 DRIRYDYYRDVTVTLEGFKAGAFDFNSEHSAKNWATEYKFPAVSEGHVITEKVPVKGPDR 316
           DR+   +  D        ++GA D  +       +   +F  +    + T   P  G   
Sbjct: 224 DRVVVRFVLDSAARAAALESGAADLANGTGGIPLSDVERFGKLPGVQIDTRISPYLG--S 281

Query: 317 EQGFIFNMRRAQFQDPRVREALAYGFDFEWTNQTLFYGQYTRTRSFFENSELAAVGLPGP 376
            Q   FN+     Q   VR A+A   D     +T++YG  T + S              P
Sbjct: 282 HQQIYFNLDTPALQKLEVRRAIAQAIDVNAFAKTVWYGYGTLSAS--------------P 327

Query: 377 EELKILEPLRAQIPPRVFTEEYQPPVTDEAKGGLRANLKKALDLMKEAGWTVNAAGKMVN 436
               I     A I P  F                           KEA   ++AAG    
Sbjct: 328 IGKGISRYHDASIQPYPFNP-------------------------KEAEAALDAAGFKRG 362

Query: 437 AAGQPFTFEILLRQADVERMVLPMVKNFERLGITATVRTVDTPQFISRV---QSFDFDMV 493
           A G      +L       R    + ++  R+GI ATV + D   ++++    ++FD  + 
Sbjct: 363 AGGTRLKLRVLYNPFQERRAADFVRQSLGRIGIDATVESYDFATYVTKAYTDRAFDITLE 422

Query: 494 SAVWAQSNSPGNEQRDLWSSTAADIPGTSNLAGLKSPAVDSLIES 538
           S       + G  QR  WS         SN A   +P VD L+E+
Sbjct: 423 SLTNLFDPTVG-VQRVFWSKNFKVGLPFSNAAHYVNPEVDRLLEA 466