Pairwise Alignments

Query, 615 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

Subject, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  606 bits (1562), Expect = e-177
 Identities = 308/600 (51%), Positives = 398/600 (66%), Gaps = 14/600 (2%)

Query: 1   MRPIAAVTLAALLALPLPLATVQAAETASSGPMHALSLYGDI-KYPADFTHFDYVNPEAP 59
           +R +A   L A L+LP           A + P HAL+LY +  KYPADF HFDYVNP+AP
Sbjct: 7   LRRLAGSLLLACLSLP-----------ALAAPQHALTLYDEPPKYPADFKHFDYVNPDAP 55

Query: 60  KGGAIRLSAFGTFDTLNPYTVKGTAAFGIGLTQTTLTVPSADEPSTEYGLVAQTMELAAD 119
           KGG  R S+FG FD+LNP+  KG AA  IG+   TL   S DEP TEYGLVA  +E A D
Sbjct: 56  KGGTFRQSSFGGFDSLNPFINKGVAAENIGIIYDTLMRQSQDEPFTEYGLVAGKIEKAPD 115

Query: 120 RSWLIFTLRPEARWSDGQPITAEDVAFSFQILKDKGQPLYNSYYSNVTGVEVLDAKRVKF 179
            SW+ F LRPEAR+ DG P+ A+DV F+F  L   G PLY  YY++V  V   +  +V F
Sbjct: 116 NSWVRFYLRPEARFHDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLF 175

Query: 180 TFSPGENRELPSIVGQLPVLPKHYWATRDFAETTLDQPVSAGPYRIASFEPGRQITYERV 239
            F    NRELP I+GQLPVLPKH++  R+F    L+ P+ +GPY++A  + GR + YERV
Sbjct: 176 KFKHKNNRELPLILGQLPVLPKHWYENREFNRGNLEIPLGSGPYKVAKVKAGRSVRYERV 235

Query: 240 KDYWAEALPVSKGMNNFDRIRYDYYRDVTVTLEGFKAGAFDFNSEHSAKNWATEYKFPAV 299
           KDYWA+ LP+++G  NFD + +D YRD TV LE  KAGAFD+  E SAKNWAT Y  PAV
Sbjct: 236 KDYWAKDLPINRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAV 295

Query: 300 SEGHVITEKVPVKGPDREQGFIFNMRRAQFQDPRVREALAYGFDFEWTNQTLFYGQYTRT 359
            EG +I E++P   P   QGFIFN+RR  FQD RVR+AL+   D+EWTN+ LF G YTRT
Sbjct: 296 REGRLIKEELPNGNPTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRT 355

Query: 360 RSFFENSELAAVGLPGPEELKILEPLRAQIPPRVFTEEYQPPVTDEAKGGLRANLKKALD 419
            S+FENSE+AA GLP P ELKILEPLR ++P +VFTE +  PV+D   G +R   ++A  
Sbjct: 356 GSYFENSEMAARGLPSPNELKILEPLRGKVPEQVFTEVFHNPVSD-GSGMIREQQRQAYK 414

Query: 420 LMKEAGWTVNAAGKMVNAAGQPFTFEILLRQADVERMVLPMVKNFERLGITATVRTVDTP 479
           L++EAGW +    KMV+A G+P + E LL Q + ER++LP  +N   LGI   +R VD  
Sbjct: 415 LLQEAGWKI-VDDKMVDAQGKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVS 473

Query: 480 QFISRVQSFDFDMVSAVWAQSNSPGNEQRDLWSSTAADIPGTSNLAGLKSPAVDSLIESV 539
           Q+I+R++S D+DM+   + QSNSPGNEQR+ WSS AAD PG+ N  GL+ PA+D L++ +
Sbjct: 474 QYITRLRSRDYDMIVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQL 533

Query: 540 IAAPTRADLIARTRALDRVLQWSFPWIPHYYGAFERIAYWNVFGRPAVTPNRGVVFQAWW 599
           I A +R  LI   RALDRVL W +  IP+++    R+AYWN  G P V+P   +    WW
Sbjct: 534 INADSRQSLIDHCRALDRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGIDTWW 593