Pairwise Alignments

Query, 615 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

Subject, 642 a.a., putative ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  447 bits (1149), Expect = e-130
 Identities = 237/578 (41%), Positives = 336/578 (58%), Gaps = 7/578 (1%)

Query: 27  TASSGPMHALSLYGDI-KYPADFTHFDYVNPEAPKGGAIRLSAF--GTFDTLNPYTVKGT 83
           T  + P HAL++YG+  +Y A F HFDYVNP APKGG +R SA   G FD + PY  KG 
Sbjct: 47  TVQAAPTHALTVYGEAPRYAASFRHFDYVNPSAPKGGILRRSAIEIGQFDHILPYIDKGI 106

Query: 84  AAFGI-GLTQTTLTVPSADEPSTEYGLVAQTMELAADRSWLIFTLRPEARWSDGQPITAE 142
               + GL    L V S DEP T YGL+A+ ME   +  WL F + P A ++DG+P+ AE
Sbjct: 107 GVSEVDGLLYAPLAVRSYDEPYTVYGLIARRMERGPNDEWLRFDIDPRATFADGRPVRAE 166

Query: 143 DVAFSFQILKDKGQPLYNSYYSNVTGVEVLDAKRVKFTFSPGENRELPSIVGQLPVLPKH 202
           DV F+F +L  KG   Y + +++V  V V     V+F   P   R L   +  LPV+P+H
Sbjct: 167 DVRFTFDLLMSKGSLKYRTQFADVARVTVERLHSVRFDLKPEHGRTLALDLASLPVMPEH 226

Query: 203 YWATRDFAETT-LDQPVSAGPYRIASFEPGRQITYERVKDYWAEALPVSKGMNNFDRIRY 261
               RDFA     D+PV +GPYRI   + GR IT+ER   +WA  LP S+G  NFD++R 
Sbjct: 227 DLQQRDFANGAGFDKPVGSGPYRIGRIDNGRSITFERDPAWWARDLPASRGRYNFDKLRI 286

Query: 262 DYYRDVTVTLEGFKAGAFDFNSEHSAKNWATEYKFPAVSEGHVITEKVPVKGPDREQGFI 321
           +Y+ D  V  +  K G +D+N E SA  +   Y    + +G +    +    P   QGF+
Sbjct: 287 EYFGDTEVARQVLKGGGYDYNREFSATAYTLGYNGAQLDDGRLQRAHLGPAKPQVAQGFV 346

Query: 322 FNMRRAQFQDPRVREALAYGFDFEWTNQTLFYGQYTRTRSFFENSELAAVGLPGPEELKI 381
           FN+ + QF+D RVR+AL   +DFEW+N+ +    Y R +S F N+ LAA  LP   ELK+
Sbjct: 347 FNLDQPQFKDRRVRQALGMLWDFEWSNRQMMRNLYIRQQSVFSNTPLAARQLPDAGELKL 406

Query: 382 LEPLRAQIPPRVFTEEYQPPVTDEAKGGLRANLKKALDLMKEAGWTVNAAGKMVNAAGQP 441
           L PLR Q+P  VFT  +  PVTD   G +R    +AL L+++AGW      ++VN+ G P
Sbjct: 407 LAPLRGQVPDEVFTTVFTAPVTD-GSGIIRQQQLQALALLEQAGWHPE-GDRLVNSQGTP 464

Query: 442 FTFEILLRQADVERMVLPMVKNFERLGITATVRTVDTPQFISRVQSFDFDMVSAVWAQSN 501
             F  L  QA +ER++LP  +N  ++G+T  +R VD+ Q+++R+ + D+DM+   +  + 
Sbjct: 465 LAFTFLNGQAGLERLLLPWKRNLAQIGVTLNIRNVDSAQYVNRLMARDYDMIVTGYPVTL 524

Query: 502 SPGNEQRDLWSSTAADIPGTSNLAGLKSPAVDSLIESVIAAPTRADLIARTRALDRVLQW 561
           SPG E  + + S AA  PG++NL  L+ PAVD LI+ ++ A T+AD++    ALDRVLQW
Sbjct: 525 SPGAELYNYFGSAAAHDPGSNNLMVLQDPAVDHLIDGLVRADTQADMLRHAHALDRVLQW 584

Query: 562 SFPWIPHYYGAFERIAYWNVFGRPAVTPNRGVVFQAWW 599
           ++ WIP+YY       +WN FG P V          WW
Sbjct: 585 NYYWIPNYYPPGSSTVWWNRFGLPKVQATYDEGLDTWW 622