Pairwise Alignments

Query, 240 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 236 a.a., putative ABC efflux transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  112 bits (281), Expect = 5e-30
 Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 28/225 (12%)

Query: 6   LLDGVVAGKGERFRVRMSGFRVGAGETVAIVGKSGSGKSTILDTIAGILRPIEVRAFRLM 65
           L D V A  G    + +   R+ AGE + + G SGSGK+T+L  + G+  P++ R   L 
Sbjct: 8   LHDLVFAWPGHPPLLDIPALRLDAGEALFLKGPSGSGKTTLLGLLGGVNVPVQGRIQLL- 66

Query: 66  SGAASVDMGKLWAADDQRALRAARARHIGYVLQTGGLAPFLSIEQNIALPL--------- 116
                 D+G L     Q A    R  H GY+ Q   L PFLS+ +N+ LP          
Sbjct: 67  ----GQDLGSL----SQGARDRFRVDHTGYIFQQFNLLPFLSVRENVELPCRFSRSRKAR 118

Query: 117 --WRDGGQDPGWTRHLMEKLGI---AGLARRLPRDVSVGERQRAAIARALAGKPDLVLAD 171
              R G  D   +  L+  LG+   A LARR    +S+G++QR A ARAL G+P+LV+AD
Sbjct: 119 AEQRHGSVDQAAST-LLTHLGLGDPAMLARRAD-SLSIGQQQRVAAARALIGQPELVIAD 176

Query: 172 EPTASLDSAQAEATMALLTALARETGVALLMVTHDRALV---ERH 213
           EPT++LD+   EA + LL    R  G +LL V+HD++L    +RH
Sbjct: 177 EPTSALDADTREAFIRLLFDECRAAGASLLFVSHDQSLAPLFDRH 221