Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 958 a.a., EAL domain-containing protein from Pseudomonas fluorescens SBW25

 Score =  438 bits (1126), Expect = e-127
 Identities = 240/606 (39%), Positives = 348/606 (57%), Gaps = 4/606 (0%)

Query: 234 GEVRDFTAE--VWRCDGHTIWITENARCV-RGPDNEVLYYEGTVEDITAQRQSQETMRLL 290
           G   D+  E  V   DGH +WI +  R V R P   V    GT  DI+A +  +E  RL 
Sbjct: 346 GRSEDYQVEYRVRHGDGHWVWIEDRGRAVERAPSGRVTRMLGTRRDISASKALEEQQRLA 405

Query: 291 GKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLATVA 350
             VF + +EGIV+L+ D  +  VN AF  +TG    DM GR      S          + 
Sbjct: 406 STVFEAASEGIVILDPDYVLIAVNQAFSRVTGFETDDMIGRNVVELPSSRDARRHFPVIR 465

Query: 351 AEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEHIR 410
             +   G W+GE+   R+ G  Y   + +  VR   G+ +H V    D++ R+  EE +R
Sbjct: 466 QALLSHGTWQGELVETRKNGELYPQWLQLNVVRDVRGKVSHIVGFFADLSARRESEERMR 525

Query: 411 FQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEV 470
           +  ++D LT L NR L  +RL +A  + ++ GR + ++ ++LDRFK +NDS GH   D++
Sbjct: 526 YLTHYDELTGLANRSLFRERLREAHQRVRQGGRSLALLHINLDRFKLLNDSLGHEVADQL 585

Query: 471 LKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTE 530
           L+  ARRL N +  +D++ RL GDEF V+     +  + A +A ++L  L  P  + G E
Sbjct: 586 LQKMARRLINALPEADTIARLSGDEFAVLFDAYGNLSSLARVATRLLAKLRVPVTVEGHE 645

Query: 531 VFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMES 590
           +    S+G++  PD+      L+  +++AM HAK  G   +  +T  +   +L  L +E+
Sbjct: 646 LVVSASMGVSLLPDNAREISALVSQSNMAMQHAKHLGGNNFQFYTDSLQASTLERLQLEN 705

Query: 591 DLRHALARDEFELHFQPKV-RADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILP 649
            LR A+   +  + +QPK+  A   L  AEALIRW HP+ G++ PGDFI LAEE+GLI+P
Sbjct: 706 HLRKAIEERQLSVFYQPKLCLATGKLNAAEALIRWEHPQWGMVPPGDFIGLAEETGLIVP 765

Query: 650 IGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDL 709
           +G + LREAC +   W+ +GL    VSVN+S  Q +   LV  VRQ+L ETGL+P+ L+L
Sbjct: 766 LGEFVLREACWQACEWQRQGLAPIRVSVNLSVHQLRQGKLVSLVRQVLEETGLDPQYLEL 825

Query: 710 EITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRD 769
           E+TE+ +   VEH + T + L+DLGV L+IDDFGTGYSSL+YLK  P+D +KIDQTF+R 
Sbjct: 826 ELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIPVDYVKIDQTFIRG 885

Query: 770 VLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAE 829
           +    +DAAI   IIA+A  L   VVAEGVE+ +Q +FL    C   QG+L SRP+    
Sbjct: 886 LGQGREDAAITRAIIAMAHGLALKVVAEGVEDQQQLDFLRGERCDEVQGYLISRPMQAEG 945

Query: 830 FTTFLR 835
               LR
Sbjct: 946 LADLLR 951



 Score = 47.4 bits (111), Expect = 4e-09
 Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 32/157 (20%)

Query: 147 RDMTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGY------- 199
           RD++A  A E   R A      +FE A EGI    PD   + VN A +R+ G+       
Sbjct: 390 RDISASKALEEQQRLAS----TVFEAASEGIVILDPDYVLIAVNQAFSRVTGFETDDMIG 445

Query: 200 ------ASPAELIAHFTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVWRCDGHTIWI 253
                  S  +   HF  I   L   GT +GE     R+ GE+            +  W+
Sbjct: 446 RNVVELPSSRDARRHFPVIRQALLSHGTWQGELVE-TRKNGEL------------YPQWL 492

Query: 254 TENARCVRGPDNEVLYYEGTVEDITAQRQSQETMRLL 290
             N   VR    +V +  G   D++A+R+S+E MR L
Sbjct: 493 QLNV--VRDVRGKVSHIVGFFADLSARRESEERMRYL 527