Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1283 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Pseudomonas fluorescens SBW25

 Score =  479 bits (1234), Expect = e-139
 Identities = 271/710 (38%), Positives = 399/710 (56%), Gaps = 25/710 (3%)

Query: 142  LVVITRDMTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGY-- 199
            ++ + +D+T Q+ A  +LR +E +YR + E+  + I  +        ++P++  + GY  
Sbjct: 565  IIGVAKDITDQIEASESLRDSEQRYRMLAESISDVICSTDSQLALNYISPSVNAVLGYDV 624

Query: 200  ------------ASPAELIAHFTDIASQLYVDGTKRGEFQRLMRETGEVRD--FTAEVWR 245
                        A+P +L    T I S +       G+ + L +   E++   F  +  R
Sbjct: 625  DWVFKNGWQSIIANPQQL----TGIYSLVEQVSRALGDIEALNKLRDEIQTQLFLFDCLR 680

Query: 246  CDGHTIWITENARCVRGPDNEVLYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLE 305
             DG  + I      V           G   DI+ QR++++ +R+   VF      I++ +
Sbjct: 681  ADGRKVPIELRLVLVWDEHGAFEGILGVGRDISQQRRAEKDLRMAATVFEHSTSAILITD 740

Query: 306  RDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWG 365
                +   N AF  ++G    D+  +   +      +   L  V  ++ +   W GE+W 
Sbjct: 741  PAGYIVQANEAFSRVSGYEVSDVLDQLPNMLTVDEQQEAHLRYVLKQLHQHSTWEGEVWL 800

Query: 366  ERREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRH 425
            +RR G  Y   + +TAV    G+   YV   +DI++RK  E+ I   A +D LTHLPNR 
Sbjct: 801  KRRNGEHYPAWVGITAVFDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRT 860

Query: 426  LIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRIS 485
            L  DRL  A+  A+R    V +MFLDLDRFK INDS GH+AGD +LK  A RL  CV   
Sbjct: 861  LFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHAAGDRMLKEMATRLLGCVAED 920

Query: 486  DSVGRLGGDEFIVIL----SNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITY 541
            D+V R+GGDEF ++L    S     +   ++AE+IL SL +PF + G E F   S+GI  
Sbjct: 921  DTVARMGGDEFTLLLQPRISREMALNRAIHVAEQILASLVKPFVLEGREFFVTASIGIAL 980

Query: 542  FPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEF 601
             P  G     L++NAD AMYHAK+ G+  +  +  DM   +L  L +ESDLRHAL ++EF
Sbjct: 981  SPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLELESDLRHALDQNEF 1040

Query: 602  ELHFQPKVRAD-LTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACD 660
             L++QP+   D   L GAEAL+RWRHP +GL+ PGDFIP+ EE GL++ +G W + EAC 
Sbjct: 1041 VLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVISEACR 1100

Query: 661  RVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDV 720
            ++ +W    + +P VSVN+S RQF D  L   +  IL +TGL P  L+LE+TE+++  +V
Sbjct: 1101 QLKTWHQNKVRVPKVSVNISARQFSDGQLGTRIATILKDTGLPPACLELELTESILMREV 1160

Query: 721  EHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIV 780
              A+  L +LK+LG+++++DDFGTGYSSLNYLK FPID LKID+TFV  +    +DA I 
Sbjct: 1161 NEALHILDSLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIA 1220

Query: 781  STIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEF 830
              IIA+A +L  +V+AEGVE  EQ +FL    C   QG+L+ RP+P   F
Sbjct: 1221 RAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPANRF 1270