Pairwise Alignments

Query, 538 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

Subject, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

 Score =  171 bits (433), Expect = 7e-47
 Identities = 147/517 (28%), Positives = 222/517 (42%), Gaps = 44/517 (8%)

Query: 39  TYEGLFNRVCRLASGFKALGLRPGERVAVIAEKRFDAVAAMFAVAHAGGVFVPINPVLKS 98
           T+  L + V + A    ALG++PG+R+ + A    +     FA A  G + V INP  +S
Sbjct: 47  TWRQLADAVDQHARALMALGVQPGDRLGIWAPNCAEWCITQFASAKVGAILVNINPAYRS 106

Query: 99  PQIVHILADSAAK-ILVAPALRL----ALLDHTPP------PSLTTLLRFGD---PAPAS 144
            ++ + L  S  + ++ A A +     A+L    P      P      RF +       +
Sbjct: 107 SELDYALGQSGCRWVICADAFKTSDYHAMLQGLLPGLASSQPGALICERFPELRGVVSLA 166

Query: 145 PDPPPG---GESLDLDALAGAGDPIAAHPVV--DDDPACFFYTSGSTGLPKAVVVTHRNL 199
             PPPG     +L   A   +G+ +AA       DDP    YTSG+TG PK   ++H N+
Sbjct: 167 LSPPPGFLAWHALQARAEVVSGEALAARQAQLRCDDPINIQYTSGTTGFPKGATLSHSNI 226

Query: 200 IAGAQSVASRLDNRPDDRLLAALPLGFDAGFSQLTTAFAVGAEAVLH--DYLLPQDVITA 257
           +     V   L     DRL+  +PL    G             A+++  D   P   + A
Sbjct: 227 LNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCMTHGSALIYPSDAFDPLATLRA 286

Query: 258 CAHHRITGLTGVPPLWAQLARLDWPPAAT---ASLRFLASTGGAMPAAVLARLRALAPLA 314
            A  + T L GVP ++  +A LD P       +SLR     G   P  V+ R+     +A
Sbjct: 287 VAQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMRRVIGEMHMA 344

Query: 315 RIHLMYGLTEAFRST--TLDPERVGRKPGSVGRAVANAEVLVLHPDGGRCAPNEIGEIVH 372
            + + YG+TE    +  T   + + R+  SVGR     E  V+  +G      EIGE+  
Sbjct: 345 EVQIAYGMTETSPVSLQTGAADDLERRVTSVGRTQPRLESKVVDAEGNTVPRGEIGELCT 404

Query: 373 RGAFVAKGYWNDPEGTARRFRPIPPHPGEPSRPGLAVW--SGDLGWQDDEGDLTIVGRSE 430
           RG  V  GYWN+P+ TA                    W  +GDL   D++G + IVGRS+
Sbjct: 405 RGYSVMLGYWNNPKATAESI-------------DAEGWMHTGDLAVMDEQGYVRIVGRSK 451

Query: 431 GLIKTSGYRVSPTEIEAPAHASGLIEDAVAFGLPDPLLGERLALVVTAPPGGAPVDLDAL 490
            +I   G  + P E+E        + D    G+P    GE +   V   PG A  +++ L
Sbjct: 452 DMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHAVSEVE-L 510

Query: 491 RRHLRAQLPAYLVPALLTQVDSLPRTASGKADRAAAR 527
           R   RA++  + VP     VD  P T +GK  +   R
Sbjct: 511 REWARARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMR 547