Pairwise Alignments

Query, 261 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

Subject, 257 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  133 bits (335), Expect = 3e-36
 Identities = 84/226 (37%), Positives = 114/226 (50%), Gaps = 2/226 (0%)

Query: 34  PHHHARGQLFGSTRGLVSVSVEAGVWVVPAIHAVWLPPNHVHWGRSHGPFDGWSVYIAPA 93
           PH H + QL  + +GL+ V      W VP    VW+P   VH  R  G     SV++   
Sbjct: 34  PHSHTKHQLIYAIKGLMIVESGNECWTVPPSRGVWMPCGQVHAIRCVGDVKMRSVFVRSD 93

Query: 94  ACQDLPSSPCTIRTSGLLREAVLRAATWPLEPFVPLDEQKAHVAAVLLDEIRNLPVEPFG 153
           A   LP     I  S LL E +++A+     PF   D ++A V  ++LDEI  LP  P  
Sbjct: 94  AATGLPLQSKAISISPLLSE-LIKASVGFTAPFAE-DSREARVMRLILDEICVLPTLPLK 151

Query: 154 LPLPRDPRLERIARALIADPADERDFEAWARWAAISPRSLGRRFVTETGFTFTAWRQRAR 213
           L  P D RL  I  AL   P D      W     +  +++ R F  ETG TF  WRQ+AR
Sbjct: 152 LSQPSDQRLRVICTALHERPEDNATVADWGLRLGVDEKTIQRLFRKETGMTFGQWRQQAR 211

Query: 214 LMRSLEMLATDLPVTTIALDLGYATASAFISLFRRTFGETPAVYRR 259
           LM++LE +A    +  +A  LGY + SAF S+F+R FG TP+ + R
Sbjct: 212 LMQALERIALGERIIDVAGALGYDSPSAFASMFKRQFGTTPSQFFR 257