Pairwise Alignments

Query, 455 a.a., Pyrrolo-quinoline quinone (NCBI) from Rhodospirillum rubrum S1H

Subject, 620 a.a., Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) from Sphingobium sp. HT1-2

 Score = 37.4 bits (85), Expect = 1e-06
 Identities = 44/169 (26%), Positives = 64/169 (37%), Gaps = 48/169 (28%)

Query: 126 DGRIFTIDREATVRAFNAETGKELWQAALPNRDDDEDDGAFLGGGLAYDRGRIFASTGFA 185
           DG I+     + + A +A TGK++W       DD       +  G A    +IF  T  A
Sbjct: 104 DGVIYVTASYSRIFALDAVTGKKIWSYTARLPDDIRPCCDVINRGAAIYGDKIFLGTLDA 163

Query: 186 KVVALRADTGQELWRTEVDGPIRAAPAVNSGRVVVLTVDNQAFALSAVDGHKLWSHSGSP 245
            ++AL   TG+ +W                         N+ F       HK        
Sbjct: 164 SMIALDRKTGKVVW-------------------------NKKF-----QDHK-------- 185

Query: 246 QTATILGAPTPAIDQ--GVVVIPYSS--------GELFALRLESGTEIW 284
              T+ GAPT   DQ  G V++ + S        GEL+A   ++G EIW
Sbjct: 186 AGYTMTGAPTIVKDQKTGRVMLIHGSSGDEFGVVGELYARDPDTGEEIW 234



 Score = 37.4 bits (85), Expect = 1e-06
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 10/96 (10%)

Query: 351 VLFLISAEAELAAVNAKTGAVIW--TTPLPRYESPDSLATPLLWTGPVLASDRLIIGSSD 408
           V+++ ++ + + A++A TG  IW  T  LP    P      ++  G  +  D++ +G+ D
Sbjct: 106 VIYVTASYSRIFALDAVTGKKIWSYTARLPDDIRP---CCDVINRGAAIYGDKIFLGTLD 162

Query: 409 ASAYAVSPYTGKILGRIELPD-----AMASAPIVAK 439
           AS  A+   TGK++   +  D      M  AP + K
Sbjct: 163 ASMIALDRKTGKVVWNKKFQDHKAGYTMTGAPTIVK 198



 Score = 32.3 bits (72), Expect = 5e-05
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 133 DREATVRAFNAETGKELWQAALPNRDDDEDDGAFLGGGLAYDRGRIFASTGFAKVVALRA 192
           D    +RA + +TGK  W+A        ++     GG L      +   T    V    A
Sbjct: 501 DHVGVLRALDPKTGKIAWEA--------KEHLPLWGGNLTTKGNIVVQGTSDGYVKLFNA 552

Query: 193 DTGQELWRTEVDGPIRAAP 211
            TG+ELW+ +    + + P
Sbjct: 553 RTGEELWKFQTGSGVVSVP 571



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 18/125 (14%)

Query: 314 LYVIGNSGLMVGMDLRSGARAWQL--RVAGTQQPW---------LAGDVLFLISAEAELA 362
           +YV  +   +  +D  +G + W    R+    +P          + GD +FL + +A + 
Sbjct: 107 IYVTASYSRIFALDAVTGKKIWSYTARLPDDIRPCCDVINRGAAIYGDKIFLGTLDASMI 166

Query: 363 AVNAKTGAVIWTTPLPRYESPDSL-ATPLLWTGPVLASDRLIIGSSD------ASAYAVS 415
           A++ KTG V+W      +++  ++   P +          LI GSS          YA  
Sbjct: 167 ALDRKTGKVVWNKKFQDHKAGYTMTGAPTIVKDQKTGRVMLIHGSSGDEFGVVGELYARD 226

Query: 416 PYTGK 420
           P TG+
Sbjct: 227 PDTGE 231



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 21/136 (15%)

Query: 261 GVVVIPYSSGELFALRLESGTEIWSDAVTAVRRTDATGSLQDIRANPVVDANHLYVIGNS 320
           GV+ +  S   +FAL   +G +IWS   TA    D       I     +  + +++    
Sbjct: 105 GVIYVTASYSRIFALDAVTGKKIWS--YTARLPDDIRPCCDVINRGAAIYGDKIFLGTLD 162

Query: 321 GLMVGMDLRSGARAW----QLRVAG---TQQPWLAGDV----LFLISAEA--------EL 361
             M+ +D ++G   W    Q   AG   T  P +  D     + LI   +        EL
Sbjct: 163 ASMIALDRKTGKVVWNKKFQDHKAGYTMTGAPTIVKDQKTGRVMLIHGSSGDEFGVVGEL 222

Query: 362 AAVNAKTGAVIWTTPL 377
            A +  TG  IW  P+
Sbjct: 223 YARDPDTGEEIWMRPM 238



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 38/170 (22%)

Query: 116 DRLLNGPVLADGRIFTIDREATVRAFNAETGKELWQAALPNRDDDEDDGAFLGGG--LAY 173
           D +  G  +   +IF    +A++ A + +TGK +W      +  D   G  + G   +  
Sbjct: 143 DVINRGAAIYGDKIFLGTLDASMIALDRKTGKVVWN----KKFQDHKAGYTMTGAPTIVK 198

Query: 174 DR--GRIFASTG--------FAKVVALRADTGQELWRTEV----DGPIRAAPAVNSGRVV 219
           D+  GR+    G          ++ A   DTG+E+W   +     G +   P+  +G   
Sbjct: 199 DQKTGRVMLIHGSSGDEFGVVGELYARDPDTGEEIWMRPMVEGHQGRLNGKPSSFTGDPK 258

Query: 220 VLTVDNQAFALSAVDGHKL--WSHSGSP--QTAT--------ILGAPTPA 257
             +  N        DG K+  W+H G    Q+AT        ++G   PA
Sbjct: 259 APSWPNDK------DGKKVEAWNHGGGAPWQSATFDVKTNTIVIGTGNPA 302