Pairwise Alignments

Query, 467 a.a., regulatory protein GntR (NCBI) from Rhodospirillum rubrum S1H

Subject, 509 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 2e-27
 Identities = 117/400 (29%), Positives = 166/400 (41%), Gaps = 52/400 (13%)

Query: 15  RPLHRAIAEVLEADIAAGRLPPGTRLPPQRDLAWRLKVTLATVGRAYALARERGLIGGEV 74
           R L + + + L A +  GRL  GTRLP  RDLA  L ++  +V RAY      G I   V
Sbjct: 21  RGLSQQLYQALRARVLDGRLSSGTRLPATRDLAAMLALSRNSVVRAYDQLYAEGFIESRV 80

Query: 75  GRGTFV-------------LGETTSAGLAPWPPQ------AGAGENGAID-LANTH-PAP 113
           G GT+V             L    S GL+ +  +      +G   +  +  L N H P P
Sbjct: 81  GDGTYVSRLPKLSTQVSTGLSLGLSTGLSTFRQENTEDLSSGRHISAPLQRLKNNHLPPP 140

Query: 114 VAG---------------PGEVAACARALV--EAGTGIFAYQPDTAAPDHRDAAARWLT- 155
            +G               P +V A  +A            Y      P  RD  A +L  
Sbjct: 141 RSGLPRAFRVGIPAFDLFPFDVWAKLQAGFWRNPSPAQLGYGDPAGEPALRDLIAAYLRR 200

Query: 156 AQGVPAGAESVLLSTGALNGVLAALMALARPGDTVLTEALTSPAFKGMA---ALLGLRLR 212
           ++G+   AE +++++GA   +      L +PGD V  E   +P ++  A    L G R+ 
Sbjct: 201 SRGLSCTAEQIVITSGAQQAISLCAQLLLQPGDGVAVE---NPGYRAAAHAFTLAGGRVC 257

Query: 213 AVASDGEGLRPEALEAALERDPSAKLLLCVPALHNPTGATLSAERRLSLTALAERFDLTI 272
            V  D +GL    LE   +     +L    PA   PTG T+S  RRL+L A AER D  I
Sbjct: 258 GVPVDEDGLDCGRLEQLTD----CRLTYVTPAHQYPTGVTMSLARRLALLAWAERSDGWI 313

Query: 273 IEDAVYAPLIENGPPSLKALMPD---RVTHVTSLSKIGLPGLRCGMVVPPTRRREAVLAA 329
           IED        +G P       D   RV +V +  KI  P LR G +V P++  +A    
Sbjct: 314 IEDDYDGEYRYSGAPLAPLAALDRHGRVLYVGTFGKIAFPALRLGYLVLPSKLVQAFSQG 373

Query: 330 LRVSCWMAPPPLAAVAARWMDDGTVTRLIAAQRLAVSERR 369
             ++   +      V A +M  G   R I   R A  +RR
Sbjct: 374 RAIAVRHSEVSSQCVMAEFMARGHFQRHIRRMRKAALKRR 413