Pairwise Alignments

Query, 116 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 63 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 52.4 bits (124), Expect = 1e-12
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 71  SQAGQKGGQNSGGNFANDPERAAEAGRKGGEASHGSSSGQSSSDHR 116
           +Q G +GG  + GNFAND E+A+EAGRKGG++S G+      S H+
Sbjct: 14  NQQGSQGGNKNPGNFANDREKASEAGRKGGQSSGGNMPHDRESGHK 59



 Score = 47.4 bits (111), Expect = 3e-11
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 7/56 (12%)

Query: 47  EAGRKGGQNVPDEKRSFSKDHELASQAGQKGGQNSGGNFANDPERAAEAGRKGGEA 102
           + G +GG   P    +F+ D E AS+AG+KGGQ+SGGN  +D     E+G KGG +
Sbjct: 15  QQGSQGGNKNPG---NFANDREKASEAGRKGGQSSGGNMPHD----RESGHKGGRS 63



 Score = 36.2 bits (82), Expect = 8e-08
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 15/68 (22%)

Query: 17 EDKQRDIASKGGQSVPNEKRSFSKDHELAAEAGRKGGQ----NVPDEKRSFSKDHELASQ 72
          +D  R    +G Q       +F+ D E A+EAGRKGGQ    N+P ++ S          
Sbjct: 7  KDNSRTGNQQGSQGGNKNPGNFANDREKASEAGRKGGQSSGGNMPHDRES---------- 56

Query: 73 AGQKGGQN 80
           G KGG++
Sbjct: 57 -GHKGGRS 63