Pairwise Alignments

Query, 629 a.a., DNA mismatch repair protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 632 a.a., DNA mismatch repair protein MutL from Pseudomonas putida KT2440

 Score =  466 bits (1200), Expect = e-135
 Identities = 279/640 (43%), Positives = 373/640 (58%), Gaps = 30/640 (4%)

Query: 3   IRLLPPVLVNRIAAGEVVERPASAVKELVENAIDAGASRIDITMTDGGRARILVVDDGRG 62
           I+LL P L N+IAAGEVVERPAS  KEL+EN++D+GA RIDI +  GG   + V DDG G
Sbjct: 7   IQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDIEVEQGGVKLLKVRDDGSG 66

Query: 63  MDPGELSLAVERHATSKLPG-DDLLDIHTLGFRGEALPSIGSVARLTLTSRAAGAGDAWA 121
           +   +L LA+ RHATSK+   +DL  + +LGFRGEAL SI SVARLTLTSR A A +AW 
Sbjct: 67  ISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAWQ 126

Query: 122 LTVEG-GAKGEPEPASHPQGTRVEVRDLFYATPARLKFLKAPRTEQMHAVDVVHRLAMAH 180
           +  EG       +PA+HP GT VEVRDLF+ TPAR KFLKA +TE  H  +V+ RLA+A 
Sbjct: 127 VETEGRDMTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALAR 186

Query: 181 PAVGFTLSDGTRQQIRLSGAQGELFEARLTRLGAILGREFSDNAIAIEAEREGIRLTGHA 240
             VGF L    +  + L  A  E+  AR  R+GAI G  F + A+ I+ ER G+RL G  
Sbjct: 187 FDVGFHLRHNGKSILSLHEAHDEIARAR--RVGAICGPGFMEQALPIDVERNGLRLWGWV 244

Query: 241 ALPTYNKATSAGQYLFVNGRPVRDKLLHGAVRGAYQDVLAHDRNAVLALYLDLPPEMVDV 300
            LPT++++ +  QY FVNGR VRDKL+  AVR AY+DVL + R+    L+L+L P  VDV
Sbjct: 245 GLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLELEPNGVDV 304

Query: 301 NVHPAKAEVRFRDPGLVRGLIIGALRHALAAAGHRASSTVSLAALGALRPAQGSGAPALP 360
           NVHP K EVRFR+   V   + G L  ALA            A    +RP          
Sbjct: 305 NVHPTKHEVRFREGRSVHDFLYGTLHRALADVRPEDQLAAPAAVPELVRPT--------- 355

Query: 361 WGAGGYGGGASHPGLEERRSAYAAQAPAGTPDPWAGRGMGAGGG------------SGQA 408
               G   G   P  E R ++   + P      ++  G GAG              + +A
Sbjct: 356 ----GQQAGEFGPQGEMRLASPVLEQPRAPQQSFSNGGSGAGYQYQYTPRPSQPLPAAEA 411

Query: 409 AMAWLAGAPPAAPRLAGEPEAPPTGAEDFPLGAARGQIHDTYIIAQTRDGVVIVDQHAAH 468
              +     P     A     P +  +  PLG A  Q+   YI+A+   G+V+VD HAAH
Sbjct: 412 QAVYREFYKPLETGAAPATALPESQGDIPPLGYALAQLKGIYILAENAVGLVLVDMHAAH 471

Query: 469 ERLVMERMKAALAERGEVARQILLLPEVVELDEPGAVRVATAAAELAKLGLVVEGFGPGA 528
           ER++ ER+K A+A  G ++ Q LL+PE + L +  A      A    +LG  ++  GP  
Sbjct: 472 ERIMYERLKVAMASEG-LSGQPLLVPETLALSQREADCAEEHAQWFQRLGFELQRLGPET 530

Query: 529 VVVREVPALLGDTDVKGLVADLAEGLAEWGTAQALEDRLGDVVATMACHGSVRAGRRLRI 588
           + +R++PALL   +   LV D+   L E+GT+  ++  L +++ TMACHG+VRA RRL I
Sbjct: 531 LAIRQIPALLKQAEANRLVQDVLADLMEYGTSDRIQAHLNELLGTMACHGAVRANRRLAI 590

Query: 589 EEMNALLRDMERTPRAGQCNHGRPTYVELRLGDIERLFGR 628
            EMNALLRDME T R+GQCNHGRPT+ ++ L D+++LF R
Sbjct: 591 PEMNALLRDMENTERSGQCNHGRPTWTQMGLDDLDKLFLR 630