Pairwise Alignments

Query, 347 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

Subject, 383 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 34/287 (11%)

Query: 38  LSVTVTAPREETVVERVGTTGTLV--PREEIVVMAEVSNARILSLAAEVGDQVQKGQKLA 95
           L +T+   ++  + + V   G L   P+ E  V A +  A ++ +    GD+VQKGQ LA
Sbjct: 45  LELTMDTVQKRNMTQLVEVNGVLEVPPQNEAAVTAYIG-ANVMDIRIIEGDKVQKGQVLA 103

Query: 96  VLDTESLLLQVAQMEAEYTKA-------RDEFVRVDSIKES--GA--------------- 131
            L    L+    ++++EY ++       + EF R +++ E+  GA               
Sbjct: 104 YLSHPELI----KIQSEYAQSWHQVEYLQKEFERQNTLYEAEVGAGRDMQKTATELATLR 159

Query: 132 VSKSLRIEKKTALDTMTAKLQEAKLAVRRTVITAPASGTVYERRAVVGGLSSQGDPLFRI 191
            S S +  +   LD   A ++E K+ + R  + +P SG + E     G        +F +
Sbjct: 160 ASVSGQESQLRLLDLDPATIREGKI-IDRIPVKSPISGYIKEVHVKTGQYVGPEYEMFEV 218

Query: 192 AGKGEIEADLRVPEGVAGRVSVGQAVRLSLPGL-KAPLTGTVRLVAPRIDASDRSASVRV 250
                I ADL V E    +V  GQ VR ++  L    L   V  V    ++  ++  +  
Sbjct: 219 VNIHHIHADLMVFEKDVSKVKEGQKVRFTVETLPDEELIAKVYAVGKSFESKPKAVHIHA 278

Query: 251 SVLTGQALMV-GAFVHADIDLGEVTGLAVPTTAIQRDSEGAFMWTVK 296
            +   + L++ G +V   +   E +  AVP  A+  D+E  F+++ K
Sbjct: 279 EIENKKGLLIPGMYVRGQVITDETSQYAVPEEAVVSDNERNFLFSAK 325