Pairwise Alignments

Query, 347 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

Subject, 383 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 82/318 (25%), Positives = 134/318 (42%), Gaps = 17/318 (5%)

Query: 39  SVTVTAPREETVV-ERVGTTGTLVPREEIVVMAEVSNARILSLAAEVGDQVQKGQKLAVL 97
           ++ VTAP ++ +V +R+   G     + +VVM +VS   +  + A  G +V KGQ LA L
Sbjct: 68  TLVVTAPAKKGIVNDRLNAIGNGQAIQSVVVMPQVSGT-LSEIRAAAGARVVKGQVLARL 126

Query: 98  DTESLLLQVAQMEAEYTKARDEFVRVDSIKESGAVSKSLRIEKKTALDTMTAKLQEAKLA 157
           D E    QV + +      R    +  S K   + S+   ++ + A +     L  A+L 
Sbjct: 127 DDEE---QVIERDKAQVALRSAIEKSSSYKNLKSFSRLDVMDAQIAEEAAKLALSTAELN 183

Query: 158 VRRTVITAPASGTVYERRAVVGGLSSQGDPLFRIAGKGEIEADLRVPEGVAGRVSVG--- 214
           ++R  I AP  G      A VG   +    +  I  + EI  +   PE  A  + VG   
Sbjct: 184 LKRRDIVAPIEGVAGIVAANVGDNVTTQSTIVSIDDRSEILVNFWAPERFATAIKVGMPV 243

Query: 215 QAVRLSLPGLKAPLTGTVRLVAPRIDASDRSASVRVSVLTGQ-ALMVGAFVHADIDLGEV 273
           +A  +S PG     TG +  V  R+D + R+  +R      +  L  G      +     
Sbjct: 244 EATSISRPG--ETFTGEIEAVDNRVDEASRTIRIRAKFGNEKDELRAGMSFGVTMRFAGE 301

Query: 274 TGLAVPTTAIQRDSEGAFMWTVKGDGGVARLAVTPLLERDGLTLVGDVSPDLRVV----- 328
           T  +V   A+Q D+EG+++W V  +              D + +  +++    VV     
Sbjct: 302 TYASVDPLAVQWDAEGSYVWRVTDNKSNKVRVQIVQRNPDAVLVKAELAEGEPVVIEGLQ 361

Query: 329 -ARAGGLVRAGDIVKTLE 345
             R GG VR G+  K  E
Sbjct: 362 RVREGGAVRVGNQTKPEE 379