Pairwise Alignments

Query, 1009 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score =  394 bits (1011), Expect = e-113
 Identities = 281/1016 (27%), Positives = 494/1016 (48%), Gaps = 32/1016 (3%)

Query: 3    MPISTWAIRNPIPPIVLFLALTIAGLIAFTKLPVTSMPSVIVPVVSVTISQPGASPTEIE 62
            M +S   I  P+   +  LA+ +AGLIA+  LPV+++P V  P + V    PGASP  + 
Sbjct: 1    MNLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMT 60

Query: 63   SQITRRVEGALAGLRGVKHITSTISEGTSLSTVEFHLETDFDRAMSDTRDAITNIRDQLP 122
            S +T  +E     + G++ + ST S G S+ T+ F+L+ + D A    + AI    + LP
Sbjct: 61   SAVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLP 120

Query: 123  RSILEPQV-QRVEIDGGALLAFSVEAPEMRAEDLAWFIDDTVSRNLLAVPGVASVRRQGG 181
              +  P V  +V      +L  ++ +  M    L   +D  V++ L  + GV  V   GG
Sbjct: 121  SDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGG 180

Query: 182  VVHEITVTLDPAKLAAFSVTAAEISRQLALTTIDLPGGRLIEGEREYSLRTLGGAQSASA 241
                + + ++   LAA  +   ++   +  + ++ P G      R   L      +S   
Sbjct: 181  QRQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240

Query: 242  LRDIWIGLGSGRGVRLGDIAEVTDGGAEARSITRLDGKPVVTFAVFRAKGASEITVGESV 301
              ++ +   +G  +RL D+AE+ DG    R     +    V   + R  GA+ I V + +
Sbjct: 241  YANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRI 300

Query: 302  KRALEDSQAADPFVTYKEIFSLVDFTQTSYQSTLYVFFE---GAILTILTVFLFLRDRRA 358
            K  L      D      ++  L D TQT   +   V  E     +L ++  F+FLR   A
Sbjct: 301  KGLLPS--ITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSA 358

Query: 359  TALAALTIPLSIIPTFLVLYFLGFSLNFVSLMAISLVTGVLVDDAIVEIENIHRHMAQAK 418
            T + ++ +PLS+I TF V+Y  GFS+N ++LMA+++ TG +VDDAIV +ENI RH+ + +
Sbjct: 359  TLIPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGE 418

Query: 419  GPYDAAMIAADEIGLAVVATTAVICAVFMPVSFMGGAAGKFFIQFGVTVSVAAFFSLMVA 478
             P  AA+  A +IG  +++ T  + AV +P+ FM    G+ F +F +T++VA   SL+V+
Sbjct: 419  TPMQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVS 478

Query: 479  RLLTPMIAAYGLKAPAHRDDK------PGLW----GLRYRHLVVWTLDNRGKTLGIAALS 528
              LTPM+ A  LK     +++       G W       Y   + W L ++  TL +A  S
Sbjct: 479  LTLTPMMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVAS 538

Query: 529  VVLSFGLVPYLSTGYLPYEDYAQSSMTIELPRGATLEQTDAVALRVVDILKKHPEVMYV- 587
            +VL+  L   +  G+ P +D        E P+  +          +  ++ + P V  + 
Sbjct: 539  LVLTVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSLS 598

Query: 588  --LTSAGGETGVNTATVEIKLLPLKARNVSQRGFESQVLSELTDLPDVR--------IKF 637
              +   G    +N+  + I L P   R+VS     S++  ++  L  +R        +  
Sbjct: 599  SYIGVDGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSI 658

Query: 638  ANSGGSKDISIALTGENAAALDAAARAIERDMRGIAGLIAVGSTAPSEQPEIVILPDFAK 697
             +         +L+  +A  L   +  + + ++    L  V S    +  ++ ++ D   
Sbjct: 659  EDRVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDRDM 718

Query: 698  AAQLGVTVQALSDAVNIATIGDIDTNLAKLNHDGRQFAIRVRLASGPTTTLDTIGELRIP 757
            A++LG++V  +++A+  A  G     ++ +     Q+ + ++ +   T     +  + + 
Sbjct: 719  ASRLGISVSQITNALYDA-FG--QRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVK 775

Query: 758  TSEGGSVPLSALAEIRFGSGPASIERYDRRRKIAVEANLV-DLSLGDALQLISDLPSMKA 816
             ++GG V LSALA I       +I    +   + +  NL    SLG+A+Q+I  +     
Sbjct: 776  ATDGGQVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIG 835

Query: 817  LPKGIEALNTGDVEEMTDLFSRFLTAIGAGLMMVYAIQVLLYKDWIQPFTRMAALPLSIG 876
            +P G++    G  E      S  L  I A ++ +Y +  +LY+ +I P T ++ LP +  
Sbjct: 836  MPLGVQTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAV 895

Query: 877  GAFLALVLTNTDLNMPAAIGILMLMGIADKNSILLVDYMVERIR-QGVPRREAIIESCAV 935
            GA LAL+++  DL M A IGI++L+GI  KN+I+++D+ +E  R QG+  R+AI ++  +
Sbjct: 896  GALLALLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALL 955

Query: 936  RARPIIMTSLAMLAGMVPIVLGIGLDTAFRAPMAVAVIGGLISSTALSLVFVPVLF 991
            R RPI+MT+LA L G VP++L  G     R P+ + ++GGL+ S  L+L   PV++
Sbjct: 956  RFRPILMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIY 1011