Pairwise Alignments

Query, 1009 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

 Score =  375 bits (964), Expect = e-108
 Identities = 273/1004 (27%), Positives = 482/1004 (48%), Gaps = 34/1004 (3%)

Query: 10  IRNPIPPIVLFLALTIAGLIAFTKLPVTSMPSVIVPVVSVTISQPGASPTEIESQITRRV 69
           I+ P+   V+ L + + G  A+ KL +   P +   +++VT + PGA+   I+  IT+ +
Sbjct: 8   IQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPL 67

Query: 70  EGALAGLRGVKHITSTISEGTSLSTVEFHLETDFDRAMSDTRDAITNIRDQLPRSILEPQ 129
           + +LA   G+ ++TS   +  S+ ++   +  D DR  ++       +R++LP+   +P 
Sbjct: 68  QQSLASAEGIDYMTSVSRQNFSIISIYARIGADSDRLFTELLAKANEVRNKLPQDSEDPV 127

Query: 130 VQRVEIDGGALLAFSVEAPEMRAEDLAWFIDDTVSRNLLAVPGVASVRRQGGVVHEITVT 189
           + +   D  AL+  S  + EM    +  ++   +   L  +PG+A     G  V  + + 
Sbjct: 128 LSKEAADASALMYVSFYSKEMSNPQITDYLSRVIQPKLATLPGMAEAEILGNQVFAMRLW 187

Query: 190 LDPAKLAAFSVTAAEISRQLALTTIDLPGGRLIEGEREYSLRTLGGA---QSASALRDIW 246
           LDP KLA F ++A +++  +         G   E + EY + ++  +   +SA A   + 
Sbjct: 188 LDPVKLAGFGLSATDVTNAVRRYNFLSAAG---EVKGEYVVTSVNASTELKSAEAFAALP 244

Query: 247 IGLGSGRGVRLGDIAEVTDGGAEARSITRLDGKPVVTFAVFRAKGASEITVGESVKRALE 306
           +       V LGD+A V  G     +++  DG P V   +     A+ + V + V+R + 
Sbjct: 245 LKTSGDSRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVIKEVRRIMP 304

Query: 307 DSQAADPFVTYKEI-FSLVDFTQTSYQSTLYVFFEGAILTILTVFLFLRDRRATALAALT 365
           + ++  P      I +    F Q S    +    E  ++ I+ VFLFL   R+  +  +T
Sbjct: 305 ELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALRSVLIPVVT 364

Query: 366 IPLSIIPTFLVLYFLGFSLNFVSLMAISLVTGVLVDDAIVEIENIHRHMAQAKGPYDAAM 425
           IPLS+I     +  +G+SLN ++L+A+ L  G++VDDAIV +ENIHRHM + K P+DAA+
Sbjct: 365 IPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHMEEGKSPFDAAL 424

Query: 426 IAADEIGLAVVATTAVICAVFMPVSFMGGAAGKFFIQFGVTVSVAAFFSLMVARLLTPMI 485
             A EI + VV+ T  + AV+ P+ F+ G  G  F +F +T++ A   S +VA  L+PM+
Sbjct: 425 EGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTLSPMM 484

Query: 486 AAYGLKAP------AHRDDK--PGLWGLRYRHLVVWTLDNRGKTLGIAALSVVLSFGLVP 537
            A  L+        AHR D+    L G RY+ L+  TLD+R   L  A + + L   L+ 
Sbjct: 485 CALLLRREQNPSGLAHRLDQLFERLKG-RYQRLLHATLDSRPVVLVFAVIILCLIPVLLK 543

Query: 538 YLSTGYLPYEDYAQSSMTIELPRGATLEQTDAVALRVVDILKKHPEVMYVLTSAGGETGV 597
           +      P ED     M    P+ A L+  +A   +   + K  PE  Y      G  GV
Sbjct: 544 FTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQFTPLFKAFPE-YYSSFQINGFNGV 602

Query: 598 NTATVEIKLLPLKARNVSQRGFESQVLSELTDLPDVRIKFAN--------SGGSKDISIA 649
            T      L P   R  +Q      V ++L ++  ++I   N         G      I 
Sbjct: 603 QTGIGGFLLKPWNERERTQMELLPLVQAKLEEISGLQIFGFNLPSLPGTGEGLPFQFVIN 662

Query: 650 LTGENAAALDAAARAIERDMRGIAGLIA-VGSTAPSEQPEIVILPDFAKAAQLGVTVQAL 708
             G+  A LD A R   R     +G  A +      ++PE+V+  D AKAAQ+GV++  L
Sbjct: 663 TAGDYPALLDVAQRIKTRAQE--SGKFAFLDIDLAFDKPEVVVDIDRAKAAQMGVSMDTL 720

Query: 709 SDAVNIATIGDIDTNLAKLNHDGRQFAIRVRLASGPTTTLDTIGELRIPTSEGGSVPLSA 768
              +    +G+ + N  +   +GR + +  ++          +    +   +G  +PLS 
Sbjct: 721 GGTL-ATLLGEAEIN--RFTLEGRSYKVIAQVERPYRDNPGWLNNYYVKNDQGQLLPLST 777

Query: 769 LAEIRFGSGPASIERYDRRRKIAVEANLVDLSLGDALQLISDLPSMKALPKGIEALNTGD 828
           L  +   + P  + ++ ++   A+   +  +SLG+AL+ + D+   +A P+G      G 
Sbjct: 778 LITLTDRARPRQLNQF-QQLNAAIIQGVPMVSLGEALKTVQDIAREEA-PEGFAFDYAGA 835

Query: 829 VEEMTDLFSRFLTAIGAGLMMVYAIQVLLYKDWIQPFTRMAALPLSIGGAFLALVLTNTD 888
             +     S      G  L +++ +    ++ +  P   +  +PLSI GA L L L  + 
Sbjct: 836 ARQYVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILVTVPLSICGALLPLFLGVSS 895

Query: 889 LNMPAAIGILMLMGIADKNSILLVDYMVE-RIRQGVPRREAIIESCAVRARPIIMTSLAM 947
           +N+   +G++ L+G+  K+ IL+V++  + R  +G+  REAI E+ A+R RP++MT+ AM
Sbjct: 896 MNIYTQVGLVTLIGLISKHGILIVEFANQLRDERGLSVREAIEEAAAIRLRPVLMTTAAM 955

Query: 948 LAGMVPIVLGIGLDTAFRAPMAVAVIGGLISSTALSLVFVPVLF 991
           + GMVP++L  G     R  + + +  G+   T  +L  +P ++
Sbjct: 956 VFGMVPLILASGAGAVSRFDIGMVIATGMSIGTLFTLFVLPCIY 999