Pairwise Alignments

Query, 305 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 302 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  213 bits (542), Expect = 4e-60
 Identities = 116/290 (40%), Positives = 173/290 (59%), Gaps = 4/290 (1%)

Query: 5   DLHDLDAFVAVARARSFRGAATLRGVSASALSTALRRLEGQLGVRLLNRTTRSVTPTEAG 64
           ++ D   F AVAR +SFR A    G+S+SA+S +++ LE +L +RL NRTTRSV+ TEAG
Sbjct: 4   NMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQRLKIRLFNRTTRSVSLTEAG 63

Query: 65  QRLLDRLGPAFGEIAGALDAVASLGDQPSGTLRLNVPSIVARHVLPAIAARFLIAHPAIT 124
             L +RL PAF EI   LD +      P+GTL++N   + AR  L ++   F   +P I 
Sbjct: 64  SNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARVAARIFLMSLLVGFTREYPDIK 123

Query: 125 LEVTTNDSFIDVLAAGFDAGIRYDERIERDMIAVPLGPRIQRFIAAGAPSYLARRGVPAT 184
           +E+TT+DS +D++  GFDAG+R    +E+DMI+V +GP ++  +AA  P Y AR G P  
Sbjct: 124 VELTTDDSLVDIVQQGFDAGVRLSCIVEKDMISVAIGPPVKLCVAA-TPEYFARYGKPRH 182

Query: 185 PRALVDHACIRHRFASGVILPWEFSHQGQVLRIAPNGPLVSTSIDISIAAAIAGLGLIYT 244
           P  L++H C+  R+ SG    W+F+ +   L IA  G ++   +D  + A + G G+ Y 
Sbjct: 183 PHDLLNHQCVVFRYPSGKPFHWQFAKE---LEIAVAGNIILDDVDAELEAVLMGAGIGYL 239

Query: 245 FEEYLRAPLARGELVAVLADWGQSFSGPFVYFPSRRQMPAPLRAFIDFLK 294
             E ++  L  G L  VL DW     G  +Y+P+R+ M   LRAF+D++K
Sbjct: 240 LYEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQYMSCGLRAFLDYVK 289