Pairwise Alignments

Query, 784 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 591 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 97.1 bits (240), Expect = 2e-24
 Identities = 94/341 (27%), Positives = 146/341 (42%), Gaps = 16/341 (4%)

Query: 395 AHSGPRGDDRKRVAFVSAFFRAHTVCKLFKAWIEDLDRDRFHVSVLHLDERADEETAAIA 454
           AH       R R+ ++S  F  H    L    +E  DR RF +          E  A  A
Sbjct: 213 AHQPAPRRPRLRLGYLSEDFHEHATAYLLAEALESHDRSRFEIFAYSYGPH--ESGAVRA 270

Query: 455 ALADRFHH-LPRGGMAARAVLGDLAPHAI-VYPELGMNNDTLRLAAL--RLAPVQAVAWG 510
            L +   H +  G +A       +A   I +  +L  +    R A L  R AP+Q    G
Sbjct: 271 RLTEACDHWVELGPLAESDCAKRIAADGIDILVDLKGHTGRARTAILAARPAPIQVAWLG 330

Query: 511 HPASSGLPTLDLFLSSDLMEPEGGEAAYSERLVRLPGLSIRYSPAFSVDDREQARRETRA 570
            P + G   +D  ++   + P G E  Y+E++VRLP   + Y P  S   R   R E +A
Sbjct: 331 FPGTFGGTCMDYIIADPFVIPPGAEGDYAEQVVRLP---LCYQPNDSRRPRALTR-EPKA 386

Query: 571 ALGLDEATPLLLSLQTHPKYAPADDALLAAIAARLPEARFALIDSRFPIPGTILRQRLDD 630
             GL E + ++       K      A+  ++    P+A    ++   P     LR  +  
Sbjct: 387 KWGLPEESLVVAVFNNTFKINAETLAVWISVLQAQPDAVLWFVEFH-PAATASLRAMIS- 444

Query: 631 AFRAQGVDPEGRILMRPPMPLEAYRRLNLAGDLFLDTPAWSGGNTTFEAIHCGLPILTLP 690
              A G+DP  R++  P +    +     A DLFLDT   +G  T  +A+  G+P++   
Sbjct: 445 ---AVGIDP-ARLIFAPRLSQAEHMARLSAADLFLDTWPCAGHTTASDALWAGVPVVAWV 500

Query: 691 GTTLWARHSAAILTALGIDETIARDREDYVDLAERLIRDPA 731
           G T  +R + ++L ALG+DE I   +  Y  LA+ L +D A
Sbjct: 501 GRTFASRVAGSLLHALGLDELITESQGAYHALAQHLAKDRA 541



 Score = 40.8 bits (94), Expect = 2e-07
 Identities = 31/117 (26%), Positives = 51/117 (43%)

Query: 27  LRLDEGGDRPGALEACRNALALAPDHPDLLAAQGAIALAENDASQARAAFDHLAATTPAD 86
           ++L   GD  GA    ++ L +AP HPD L   G +A+ +    +A        A +P  
Sbjct: 10  VKLHLSGDLDGAAGLYKSLLKIAPLHPDGLHLSGLVAMQKGQLKEAERFIRGAIAASPKA 69

Query: 87  ARGWHGLGRVHLALGEPADALLALDRATERAQAPLAGLAHDRALALRQLGRFDEALA 143
           A     L  V ++ G P +A+    +A +   + + G  +  ALA +       ALA
Sbjct: 70  AAFHGNLATVLMSDGRPNEAMECYRKAVQLDDSYVDGWRNMAALAAQTGDHETSALA 126



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 20/55 (36%), Positives = 23/55 (41%)

Query: 268 DALSALATALWWSGDFPGALVPLRRALVLDPSHPTALWQSMLYPLQPVYATEAAR 322
           D L   A  L  SGD  GA    +  L + P HP  L  S L  +Q     EA R
Sbjct: 3   DQLLQDAVKLHLSGDLDGAAGLYKSLLKIAPLHPDGLHLSGLVAMQKGQLKEAER 57