Pairwise Alignments

Query, 585 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 595 a.a., TPR repeat (NCBI) from Rhodospirillum rubrum S1H

 Score =  249 bits (636), Expect = 2e-70
 Identities = 213/600 (35%), Positives = 282/600 (47%), Gaps = 46/600 (7%)

Query: 5   LALALKLLEAGLVESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALALAAFTRGLAV 64
           +A A  L E G    A       L+R P    A  LAGL     G G    A  + G AV
Sbjct: 15  IARADALREGGAPAEARDLYRLVLDRHPGHGPA--LAGLGRILLGLGQPTAALESLGAAV 72

Query: 65  AADDAPLRIE-RAGLLLDLGRAEEALADLAVALALAPDHQAVLSTQGRALIDLGRPGEAL 123
           AAD  P R++  A L + L  A      L+ A  L P     L  +   L +LGR  +A+
Sbjct: 73  AAD--PTRLDWLADLAVALAGARRPAEALSAAEGL-PATAGALGFRADRLEELGRRDQAI 129

Query: 124 APLRRARALAPDDVAPAHNLGRALLALDRPDEALPLLEAAVARAPGAIDPRADLAEALRR 183
           A L  A    PD+       G  L    R  +A+    A VA  PG     + L   L  
Sbjct: 130 ALLDDALRRHPDEAELHRRQGVLLRRAGRAAQAIAPWRALVALRPGDAAAWSSLGAGLGE 189

Query: 184 LDRPGDAAQLLRAVLADAPGRADLADALAGALLAAGAVDESVAVLRASLDKAPTHGAGWV 243
                +A + LR  +A A    D    LA  L+    +++++ +L A++ +AP       
Sbjct: 190 SGLDEEAEKALRRAVALAADEPDWTYNLAHFLIERDRLEDALPLLDAAVARAPERAHYHT 249

Query: 244 NLAAALIETGALDEATAAADRALALDPDDADAKVNRAFARCLADDYEQGFADYAHRWRTA 303
           NL    +  G +  A AA  +ALALDPD+ +A+ + A+A  LA  +E+G+A +  RWR  
Sbjct: 250 NLGVCRLGLGDIKGAIAAHRQALALDPDEPEARYDLAWALLLAGAWEEGWAAHEARWRMG 309

Query: 304 AF--QRPYPPVTA----PPWAGEPLGEG-TLLVRGEQGLGDQIMAARFL-PWLSKRPDRP 355
            F  +R   P       P W G+PLG G TLL+  EQG GD +M +R + P L++  D  
Sbjct: 310 RFTGRRAAGPAPTDWPMPLWDGQPLGPGRTLLLHAEQGFGDSLMMSRLIIPALARAGDAQ 369

Query: 356 RRIVFECHPCLHRLLAEGLEAGID----LLAMGRPPPPVAAWIGALDLARMAGVTAGVMP 411
              + EC P L  LLA+ L   +     ++A    PP   A +  + L    GV +  +P
Sbjct: 370 G--IIECPPSLVGLLAQSLGPALGPAVRVVAQAESPPAADAHLPLMSLPHRLGVDSETIP 427

Query: 412 VDVPYLKARP-PVPPLAPPLPPGGRGRLGLVWAG---KTRPRDRSCP---LEPLAGLCVD 464
               +L+A P P PP +PP       R+GLVWAG       R RSCP   L PL     D
Sbjct: 428 GPDRWLRAEPAPRPPSSPP-------RVGLVWAGDPGNRMDRLRSCPATALRPLFDRVKD 480

Query: 465 QG----WTVHALQLGPRRADLAGLPAGLGVIDEGDRLGDMAATASVMAGLDLVVAVDTAV 520
            G    WT   LQLGP  ADL  LPA L         GD AATA V+A LDLV+ VDTAV
Sbjct: 481 AGLDIAWT--GLQLGPPAADLPDLPAALAPG------GDFAATARVVAALDLVIGVDTAV 532

Query: 521 AHLAGALGLPCALLLLATPDWRWGQKASRTVWYPSLRLFRQPHPGDWDGAFDAVRRAFAQ 580
            HLAG LG+   ++L   PD+RW      + WYPS RLFRQ   GDW G    V  A  +
Sbjct: 533 IHLAGGLGVETWVMLAYVPDYRWMMDRDDSPWYPSARLFRQSRRGDWRGVIAQVAAALTK 592