Pairwise Alignments

Query, 585 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 548 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score =  223 bits (568), Expect = 2e-62
 Identities = 192/574 (33%), Positives = 257/574 (44%), Gaps = 48/574 (8%)

Query: 8   ALKLLEAGLVESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALALAAFTRGLAVAAD 67
           A++    G +E AA    + L  D  +  A H+ G +A R GD A A       LA    
Sbjct: 14  AVQAFNGGNLEMAAAECERMLGIDRRNTAAMHILGSVAFRRGDPAGAADL----LAKVVK 69

Query: 68  DAPLRIERAGLLLDLGRAEEALADLAVALALAPDHQAVLSTQGRALIDLGRPGEALAPLR 127
             P RI                             QAV+ T G A + L R  +A A  R
Sbjct: 70  QDPGRI-----------------------------QAVI-TLGEAQLALSRFSDAAANFR 99

Query: 128 RARALAPDDVAPAHNLGRALLALDRPDEALPLLEAAVARAPGAIDPRADLAEALRRLDRP 187
           +  A  PDD  P +NLG AL  L R DEA  +LE      P    P   L +  R   R 
Sbjct: 100 KVAAARPDDPVPHYNLGLALRGLGRLDEAAAVLERCRDMDPSVPAPWNVLGDIRRAQGRL 159

Query: 188 GDAAQLLRAVLADAPGRADLADALAGALLAAGAVDESVAVLRASLDKAPTHGAGWVNLAA 247
            +A   L   +   PG +   + L  AL A    +E+++VL   L   P       +L  
Sbjct: 160 DEAVTCLERAIQLDPGHSMAYNNLGVALQAQDRTEEAISVLERGLALQPDDPELHYSLGC 219

Query: 248 ALIETGALDEATAAADRALALDPDDADAKVNRAFARCLADDYEQGFADYAHRWRTAAFQR 307
           +L E     +ATA+  RA+AL PD   A  N + +     D+ +G+A+Y  RW+T     
Sbjct: 220 SLQEATRTADATASYRRAIALRPDYGAAHWNLSHSLLRGGDFSEGWAEYDWRWQTVQTAD 279

Query: 308 PYPPVTAPPWAGEPLGEGTLLVRGEQGLGDQIMAARFLPWLSKRPDRPRRIVFECHPCLH 367
            +P    P W G+P    T+L+  EQGLGD +   RF P L+    +   +V +  P   
Sbjct: 280 RHPQ---PLWTGDPADGRTILLWEEQGLGDTLQFIRFAPQLAAAGWKVVAVVQK--PL-- 332

Query: 368 RLLAEGLEAGIDLLAMGRPPPPVAAWIGALDLARMAGVTAGVMPVDVPYLKARP-PVPPL 426
           +LL   L AG+++LA G   PP       + L    G T   +P   PYL A P  V   
Sbjct: 333 KLLLSNL-AGVEVLARGEALPPFDVHCPLMGLPGRLGSTPETIP-SRPYLAAEPGKVAAW 390

Query: 427 APPLPPGGRGRLGLVWAGKT---RPRDRSCPLEPLAGLCVDQGWTVHALQLGPRRADLAG 483
              L   G  R+G+VW G     R   RS P   LAGL       +  LQ   +R +L  
Sbjct: 391 RERLVSQGL-RVGVVWRGNPDNKRNPYRSMPSPLLAGLLNRPDVQLVNLQKDAQRDELDA 449

Query: 484 LPAGLGVIDEGDRLGDMAATASVMAGLDLVVAVDTAVAHLAGALGLPCALLLLATPDWRW 543
           + AG  + D    L D + TA+++A LDLVV V T+V HLAG LG+P  +LL A  DWRW
Sbjct: 450 MGAGARLFDATSDLTDFSDTAALVASLDLVVTVCTSVCHLAGGLGVPTWVLLDARADWRW 509

Query: 544 GQKASRTVWYPSLRLFRQPHPGDWDGAFDAVRRA 577
            +    + WYPS RLFRQP PGDW      V  A
Sbjct: 510 FEGRLDSPWYPSARLFRQPSPGDWASVMAQVSEA 543



 Score = 28.5 bits (62), Expect = 7e-04
 Identities = 17/61 (27%), Positives = 26/61 (42%)

Query: 7   LALKLLEAGLVESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALALAAFTRGLAVAA 66
           L + L      E A   + + L   PDDP  H+  G   +     A A A++ R +A+  
Sbjct: 183 LGVALQAQDRTEEAISVLERGLALQPDDPELHYSLGCSLQEATRTADATASYRRAIALRP 242

Query: 67  D 67
           D
Sbjct: 243 D 243