Pairwise Alignments

Query, 511 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 514 a.a., ABC transporter, nucleotide binding/ATPase protein (sugar) from Agrobacterium fabrum C58

 Score =  329 bits (844), Expect = 1e-94
 Identities = 203/516 (39%), Positives = 295/516 (57%), Gaps = 18/516 (3%)

Query: 6   PALRLRAITKRFGALLANDAISLDLAKGEILALLGENGAGKTTLMNILFGHYLADSGSIE 65
           P L +R +TK FG   A + I LD+A GEI ALLGENGAGK+TL+ +LFG      G I 
Sbjct: 2   PLLSVRKLTKLFGNFAACNGIDLDIAPGEIHALLGENGAGKSTLVKMLFGVLSPTEGDII 61

Query: 66  VFGKPLTAASPRAAIAAGLGMVHQHFTLAENLSVLENVLIGTEPLWLPRLGRAKARARLL 125
             G+P++  SP  A   G+GMV QHF+L E L+V EN+ +  +P    ++   +      
Sbjct: 62  WQGQPVSVGSPSEARRLGIGMVFQHFSLFEALTVAENIALSLDP----KISLKEIAREAE 117

Query: 126 ALGRRFGLEVNPDAAVAALSVGERQRVEILKALYRDARILILDEPTAVLTPQESEALFST 185
            L R +GL ++P+A VA LSVGERQR+EI++AL ++ R++ILDEPT+VLTPQE++ LF T
Sbjct: 118 QLSRAYGLPLDPNAHVADLSVGERQRIEIVRALLQNPRLIILDEPTSVLTPQEADKLFET 177

Query: 186 LRTMVGDGLSVIFISHKLNEVAAVSSRVAVLRGGKLVAERPTAGMNRAALAELMVGRPVA 245
           L  +  +G SV++ISH+L EV  +  R  VLR GK+           A+LA +MVG  VA
Sbjct: 178 LAKLKAEGRSVLYISHRLEEVQRICDRATVLRHGKVTGACDPRKETPASLARMMVGSDVA 237

Query: 246 DPVRRPLPP-GPPALALRAITVNGPGIRAP----LRDVSLTVHRHEIVGIAGVSGNGQAT 300
              R      G P + +  ++V     R P    L+ +S+ V   E++ IAGV+GNGQ  
Sbjct: 238 SVSRATGEALGAPQIEVMGLSV---APRTPFAVALKSISMNVRAGEVLAIAGVAGNGQGE 294

Query: 301 LAALISG-LVAPTSGQFRLFGQEPARHRPTQMITLGVGRIPEDRHAEGLVGDLAIWENLI 359
           L   +SG      +    L G+   R        +G G +PE+RH    V  +++ +NL+
Sbjct: 295 LFDALSGEYPVYNNDAIHLRGKPVGRLGINGRRLMGAGFVPEERHGHAAVPGMSLSDNLL 354

Query: 360 AEQYRD--KAFQRAGF---VKRKAARAHARALIADFDVRCSSPDATTRLLSGGNMQKLIL 414
             + R   KAF   GF   V+    +A AR +    DVR S  D     LSGGN+QK I+
Sbjct: 355 LARSRSDRKAFLTGGFLRIVRGSTIKAAARRISETMDVRKSGADPLAGSLSGGNLQKFIV 414

Query: 415 GRTLTRDPGLILANQPNRGLDIGAVAFVHDRLLRAREKGAAIVLISEDLDEILALSDRIA 474
           GR L R P +++ NQP  G+D GA + +   L+   + G+A+++IS+DLDEI  ++  IA
Sbjct: 415 GRELDRQPSVLVVNQPTWGVDAGAASRIRQALVDLAKAGSAVIVISQDLDEIFEVATNIA 474

Query: 475 VIHAGRLSPPVARESVTIGQLGVMMAGDGPQEAGHA 510
           VI  G LS     E +T+ ++G++M G    ++G A
Sbjct: 475 VISDGMLSEAHPVEEMTLEKIGLLMGGIHTSQSGAA 510