Pairwise Alignments

Query, 186 a.a., Predicted periplasmic ligand-binding sensor protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 309 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 93.6 bits (231), Expect = 3e-24
 Identities = 75/238 (31%), Positives = 107/238 (44%), Gaps = 78/238 (32%)

Query: 1   MNQTERDMIEGLFGKLRTVESQAPQRDSDAERFIAQRIAASPNAAYYMAQTILVQEQALK 60
           M   ER +I+GLF ++R+V SQ   RD++AE  IA+R+A +P+A Y +AQ++LVQE AL+
Sbjct: 1   MTPEERALIDGLFDRMRSVASQP--RDAEAEALIARRVAEAPHATYALAQSVLVQEHALQ 58

Query: 61  AANERLTEMERE---RETRPA--------ASGGFLSGLFGGG------------------ 91
            A  R+ ++E +    E R A        +SGGFL GLFGGG                  
Sbjct: 59  QAYGRVQDLEAQLADAEARAAEAQQRSSGSSGGFLGGLFGGGRSSVPSAGAREGGQYSGQ 118

Query: 92  ----------------SQPQPPRRAAPMGASYGGHSPHPGAAFAN--------------- 120
                           +Q Q P +   + A YG  + +    +A                
Sbjct: 119 PSSGQPSSGQPWGQSATQQQQPGQPMGLPAGYGQQAGYGQQGYAQQGGYPQQGYPQQGGY 178

Query: 121 -----------APQ-----GGFLAGAMQTAMGVAGGVLMGNAIMSLFSGDEAQAAEPA 162
                      APQ     GGFL GA+ TA GVAGG L+ + I ++ +G     A  A
Sbjct: 179 GQQGGPWAQQAAPQPQRSGGGFLQGALATAAGVAGGALLYDGIKNMMTGGGGAVAHAA 236