Pairwise Alignments

Query, 820 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 957 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  235 bits (600), Expect = 8e-66
 Identities = 169/551 (30%), Positives = 274/551 (49%), Gaps = 19/551 (3%)

Query: 249 QLRLQS-VLESTSDGIITVDDKGSIESINGAAERVLGLTRDEAVGRPLGDLIPLDRLAED 307
           Q RL S V E+ S+GI+ +D    + ++N A  RV G   D+ +GR + +L P  R   D
Sbjct: 401 QQRLASTVFEAASEGIVILDPDYKLIAVNQAFSRVTGFETDDMIGRNVVEL-PSSR---D 456

Query: 308 GGEEGALSRRLLALRGR-EIDLPARRADGAAFH--LSLKLSDFMLGERRYFNALIADVTD 364
                 + R+ L   G  + +L   R +G  +   L L +   + G+  +     AD++ 
Sbjct: 457 ARRHFPVIRQALLSHGTWQGELVETRKNGELYPQWLQLNVVRDVRGKVSHIVGFFADLSA 516

Query: 365 RKAMIDRLTFLAQRDPLTGLINRRSFFDDLEKAVARAGRFPAAGVAVISIDLDRFKYVND 424
           R+   +R+ +L   D LTGL NR  F + L +A  R  R     +A++ I+LDRFK +ND
Sbjct: 517 RRESEERMRYLTHYDELTGLANRSLFRERLREAHQRV-RQGGRNLALLHINLDRFKLLND 575

Query: 425 SLGHQAGDCLLKEVAEVLFGRLRETDLLARLGGDEFAVLLHGVNREGALHVAEALRLCLA 484
           SLGH+  D LL+++A  L   L E D +ARL GDEFAVL        +L       L   
Sbjct: 576 SLGHEVADQLLQKMARRLINALPEADTIARLSGDEFAVLFDAYGNLSSLARVATRLLAKL 635

Query: 485 DYAFSYDGKSVEIGCSLGVATWAADVDDPEDLLARADMAMRLAKRAGRNRVHLFEEGDLE 544
               + +G  + +  S+GV+    +  +   L+++++MAM+ AK  G N    + +    
Sbjct: 636 RVPVTVEGHELVVSASMGVSLLPDNAREISALVSQSNMAMQHAKHLGGNNFQFYTDS--- 692

Query: 545 VRARVVADAGYSKLIDRGLRNNLFRPVFQPIIDVTSGAVVGHETLARLHDPAAIGLTMDV 604
           ++A  +        + + +        +QP + + +G +   E L R   P    +    
Sbjct: 693 LQASTLERLQLENHLRKAIEEGQLTVFYQPKLCLATGKLNAAEALIRWEHPQWGMVPPGD 752

Query: 605 LIPVAERFGLAVEIDRQIILAVTEALAEDAGWLEGGF----LSFNLSAQSVGDGRIFSAV 660
            I +AE  GL V +   ++    EA  +   W   G     +S NLS   +  G++ S V
Sbjct: 753 FIGLAEETGLIVPLGEFVL---REACWQACEWQRQGLAPIRVSVNLSVHQLRQGKLVSLV 809

Query: 661 RRLIATRRLPPQALIFEITETAAIASLAAARTFLKALTDLGCKTALDDFGSGYSSFTYLR 720
           R+++    L PQ L  E+TE+  + S+       + L DLG K A+DDFG+GYSS +YL+
Sbjct: 810 RQVLEETGLDPQYLELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLK 869

Query: 721 ELPVDFLKIDGRYVRDIHHDPVKAAMVQAINTVAHAMGMRTIAECVEEASGLEVLRQSGV 780
            +PVD++KID  ++R +      AA+ +AI  +AH + ++ +AE VE+   L+ LR    
Sbjct: 870 RIPVDYVKIDQTFIRGLGQGREDAAITRAIIAMAHGLALKVVAEGVEDQQQLDFLRGERC 929

Query: 781 DCAQGFLFGRP 791
           D  QG+L  RP
Sbjct: 930 DEVQGYLISRP 940