Pairwise Alignments

Query, 665 a.a., Gram negative topoisomerase IV, subunit B (NCBI) from Rhodospirillum rubrum S1H

Subject, 629 a.a., DNA topoisomerase IV subunit B from Rhodanobacter sp000427505 FW510-R12

 Score =  478 bits (1230), Expect = e-139
 Identities = 282/632 (44%), Positives = 386/632 (61%), Gaps = 30/632 (4%)

Query: 17  YTARSIEVLEGLEPVRRRPGMYIGGTDERALHHLVAEILDNAMDEAVAGYAQVIDIDLAV 76
           Y A  IEVL GL+PV+RRPGMY   TD    +HLV E++DN++DEA+AGYA  I++ L  
Sbjct: 5   YNAADIEVLSGLDPVKRRPGMY---TDTTRPNHLVQEVVDNSVDEALAGYATAIEVVLHG 61

Query: 77  DGSVCVRDNGRGIPIDPHPRFPDKSALEVILTTLHSGGKFGGDAYKVSGGLHGVGISVVN 136
           DGSV V D+GRG+P+D HP     S +E+I+T LH+GGKF G  Y  SGGLHGVG+SVVN
Sbjct: 62  DGSVEVSDDGRGMPVDIHPE-EGVSGVELIMTRLHAGGKFSGKNYNFSGGLHGVGVSVVN 120

Query: 137 ALSDSLRVEVARDRTLWAQDFCRGAPLGPLQKIGPAPNRR-GTQVRFHPDAEIFGPRARF 195
           ALS+ + V + RD + +   F  G  + PL+ IG  P +R GT +RF P+A+ F    + 
Sbjct: 121 ALSEKVEVTIRRDGSEYRMVFAHGDKISPLEVIGSVPKKRSGTTLRFWPEAKYFDS-PKI 179

Query: 196 KPALLHRMARSKAYLFRGVRIRWSCAPELLPDDAGVPAEDVFHFPNGLGDYLGHALANRP 255
             A L  + R+KA L  G+ ++++       D+A     + +H+ +GL DYL   L    
Sbjct: 180 SLAKLKHLLRAKAVLCAGLSVKFT-------DEASSEVVE-WHYEDGLRDYLRGELDGIE 231

Query: 256 LVGGRTFAGTANLPDDMGTVEWALCWPEDDEPFFNSYVNTIPTPEGGTHEAGLRNALTRG 315
            +    F    ++  D+  +E AL W  + E    SYVN IPT +GGTH  GLR+ LT  
Sbjct: 232 ALPNDLFVH--HMARDVEGLEVALAWLPEGELVQESYVNLIPTAQGGTHVNGLRSGLTTA 289

Query: 316 LRSFAEMSGNKKGAAALTAEDVVGGAAVMFSMFLRDPQFQGQTKEKLASQEATRLVEQAL 375
           +R F ++         L  EDV    + + S  L+DPQF GQTKE+L+S+ A  LVE  +
Sbjct: 290 VREFCDIRNLLPRGVKLAPEDVWERLSFVLSTRLQDPQFAGQTKERLSSRHAAGLVENVI 349

Query: 376 RDPFDHWLTGAPDSANLLLTHALERADERLRRRQAKETSRKTATKKLRLPGKLSDCTRST 435
            D F  WL    +    + T A+ERA  RL  + AK+  RK  T+  +LPGKL+DCT + 
Sbjct: 350 HDAFSLWLNQNVEMGERIATLAIERASARL--KAAKQIVRKKITQGPQLPGKLADCTATD 407

Query: 436 RQGTELFLVEGDSAGGSAKQARDRQTQAVLPLRGKILNVASASLDKLRGNQELSDLAEAL 495
              TELFLVEGDSAGGSAKQARD++ QA+LPLRGKILN        +  ++E+ +LA A+
Sbjct: 408 LSRTELFLVEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVESTLVLASEEVHNLAVAI 467

Query: 496 GCGTRGAFDLEHLRYDKVVIMTDADVDGAHIASLLMTFFFREMPALVSAGHLYLAMPPLY 555
           GC   G  DL  LRY KV+I+ DAD DG HIA+LL   F R  P LVS GH+++AMPPL+
Sbjct: 468 GCDP-GKDDLSGLRYGKVIILADADSDGLHIATLLSALFLRHFPKLVSEGHVFVAMPPLF 526

Query: 556 RLTQGGTSVYARDDAHKDQLMKTV--FKTKGKVEISRFKGLGEMPPAQLRETTMAYATRQ 613
           R+  G    Y  D+A K+ +++ V   K KG V  +RFKGLGEM P QLRE+T+   TR+
Sbjct: 527 RVDVGKQVFYCLDEAEKEAMLQRVEREKMKGAVSTTRFKGLGEMNPPQLRESTIHPDTRR 586

Query: 614 LLRVTVPGGKTEEDREDARETAKLVEELMGRK 645
           L+++TV         +D   TA+L++ L+ +K
Sbjct: 587 LVQLTV---------DDGDGTARLMDLLLAKK 609