Pairwise Alignments

Query, 665 a.a., Gram negative topoisomerase IV, subunit B (NCBI) from Rhodospirillum rubrum S1H

Subject, 634 a.a., DNA topoisomerase IV subunit B from Pseudomonas putida KT2440

 Score =  457 bits (1176), Expect = e-133
 Identities = 271/636 (42%), Positives = 372/636 (58%), Gaps = 31/636 (4%)

Query: 14  ADAYTARSIEVLEGLEPVRRRPGMYIGGTDERALHHLVAEILDNAMDEAVAGYAQVIDID 73
           A AY A +IEVL GL+PVR+RPGMY   TD    +HL  E++DN++DEA+AG+A+ + + 
Sbjct: 6   ASAYNADAIEVLSGLDPVRKRPGMY---TDTSRPNHLAQEVIDNSVDEALAGHARSVQVI 62

Query: 74  LAVDGSVCVRDNGRGIPIDPHPRFPDKSALEVILTTLHSGGKFGGDAYKVSGGLHGVGIS 133
           L  D S+ V D+GRG+P+D HP     S +E+ILT LH+GGKF    Y+ SGGLHGVGIS
Sbjct: 63  LHADHSLEVSDDGRGMPVDIHPE-EGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGIS 121

Query: 134 VVNALSDSLRVEVARDRTLWAQDFCRGAPLGPLQKIGPAPNRR-GTQVRFHPDAEIFGPR 192
           VVNALS  +RV V RD   +   F  G     L+ +G    R  GT V F PD + F   
Sbjct: 122 VVNALSTQVRVRVKRDGNEYQMTFADGFKASELEVVGSVGKRNTGTSVYFSPDPKYFDS- 180

Query: 193 ARFKPALLHRMARSKAYLFRGVRIRWSCAPELLPDDAGVPAEDVFHFPNGLGDYLGHALA 252
            +F  + L  + ++KA L  G+ + +        +D     +  +H+ +GL  YL  ++ 
Sbjct: 181 PKFSISRLKHVLKAKAVLCPGLLVSF--------EDKASGEKVEWHYEDGLRSYLVDSVN 232

Query: 253 NRPLVGGRTFAGTANLPDDMGTVEWALCW-PEDDEPFFNSYVNTIPTPEGGTHEAGLRNA 311
               +    F G+  L  +   V+WAL W PE  +    SYVN IPT +GGTH  GLR  
Sbjct: 233 EFQRLPDEPFCGS--LAGNKEAVDWALLWLPEGGDSIQESYVNLIPTAQGGTHVNGLRQG 290

Query: 312 LTRGLRSFAEMSGNKKGAAALTAEDVVGGAAVMFSMFLRDPQFQGQTKEKLASQEATRLV 371
           L   +R F E          L  EDV      + SM ++DPQF GQTKE+L+S+EA   V
Sbjct: 291 LLDAMREFCEFRNLLPRGVKLAPEDVWERITFVLSMKMQDPQFSGQTKERLSSREAAAFV 350

Query: 372 EQALRDPFDHWLTGAPDSANLLLTHALERADERLRRRQAKETSRKTATKKLRLPGKLSDC 431
              ++D F  WL   P+    L   A+  A  RL  + +K+  RK  T+   LPGKL+DC
Sbjct: 351 SGVVKDAFSLWLNAHPELGMQLAELAISNAGRRL--KASKKVERKRITQGPALPGKLADC 408

Query: 432 TRSTRQGTELFLVEGDSAGGSAKQARDRQTQAVLPLRGKILNVASASLDKLRGNQELSDL 491
                   ELFLVEGDSAGGSAKQARD++ QA+LPLRGKILN       ++  +QE+ ++
Sbjct: 409 AGQDPMRAELFLVEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNI 468

Query: 492 AEALGCGTRGAFDLEHLRYDKVVIMTDADVDGAHIASLLMTFFFREMPALVSAGHLYLAM 551
           A A+G    GA DL  LRY K+ I+ DAD DG HIA+LL   F +    LV AGH+Y+AM
Sbjct: 469 AVAIGVDP-GATDLAQLRYGKICILADADSDGLHIATLLCALFVQHFRTLVEAGHVYVAM 527

Query: 552 PPLYRLTQGGTSVYARDDAHKDQLMKTVF--KTKGKVEISRFKGLGEMPPAQLRETTMAY 609
           PPLYR+  G    YA D+A +D ++  +   K +GK +++RFKGLGEM P QLRETTM  
Sbjct: 528 PPLYRIDLGKEIYYALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDP 587

Query: 610 ATRQLLRVTVPGGKTEEDREDARETAKLVEELMGRK 645
            TR+L+++T+         +D   T +L+++L+ +K
Sbjct: 588 NTRRLVQLTL---------DDVEATCELMDKLLAKK 614