Pairwise Alignments

Query, 348 a.a., RNA methyltransferase TrmH, group 3 (NCBI) from Rhodospirillum rubrum S1H

Subject, 248 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Pseudomonas putida KT2440

 Score =  137 bits (346), Expect = 2e-37
 Identities = 87/239 (36%), Positives = 126/239 (52%), Gaps = 22/239 (9%)

Query: 118 LFGRHAVEAALQNPERKALRLLALAGAAEGLPKGGPTVEPADREAIEAVVPPG------- 170
           ++G HAV+A LQ+  ++  ++    G +E      P +E     A E  VP G       
Sbjct: 7   IYGVHAVQALLQHHPKRVKQIWLSEGRSE------PRLETLLALAAENRVPVGQAERREM 60

Query: 171 -----AVHQGLALKVAPLS---QPTVEEIA-RIPGPSVVAILDQVSDPHNIGAVLRSAAA 221
                 VHQG+  +V+P     +  +EE+  R   P ++ +LD V+DPHN+GA LR+A A
Sbjct: 61  DAWVEGVHQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADA 120

Query: 222 FGIRAVVVQDRHSPEETGTLAKSASGTLERVPLVRAINLSQALDTFKEHGFWCAGLDASA 281
            G  AV+V    S   T  + K A G  E +PLV   NL++ L+  ++ G W  G    A
Sbjct: 121 AGATAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEA 180

Query: 282 ETTLAEAALPERCVVVLGSEGAGLRRLVRDHCDLLVKLAMDSGVESLNVSNAAAVTFYE 340
           E  + +  L    V+++G+EG G+RRL R+HCD LVKL M   V SLNVS A  V  +E
Sbjct: 181 EQEIYQQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFE 239