Pairwise Alignments

Query, 330 a.a., Pseudouridine synthase, RluD (NCBI) from Rhodospirillum rubrum S1H

Subject, 225 a.a., RNA pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  143 bits (361), Expect = 3e-39
 Identities = 91/225 (40%), Positives = 124/225 (55%), Gaps = 8/225 (3%)

Query: 96  ILHEDAHLIVINKEAGLAVQGGTGTPHHLDGMLESLADG-GETPRLVHRLDKDTSGVLVL 154
           +L+ D  +++I+K AGLAV  G     HL   L++L+ G    P L HRLD++TSG LVL
Sbjct: 7   LLYRDPAVLIIDKPAGLAVHAGPKGGEHLMLYLDALSFGLKRRPELAHRLDRETSGCLVL 66

Query: 155 ARTQAAARALTSAFRSREALKVYWAIVVGRPPMLQGTIKGALAKVAGGRGERMEINEEEG 214
            RT  A   L   F    A K YWA+VVG+P   QG I  AL K     G RME+ +  G
Sbjct: 67  GRTSKALAGLGELFAKGLADKTYWAVVVGKPREDQGVIDYALKKREKKFGWRMEV-DRTG 125

Query: 215 KRAVTDFRVVDQAAKACAWVELHPRTGRTHQLRVHCLEMGTPILGDGKYGGPGAFLEGTE 274
             +VT +R++    +  +W+E  P TGRTHQ+R HC  +G P++GD  YG     L G  
Sbjct: 126 LASVTQWRLLGSDGR-LSWLECRPLTGRTHQIRAHCAAIGHPLVGDSIYGRGTGTLAG-- 182

Query: 275 LPKRMHLHARALALPHPAG-GVLEIIAPPPPHFVESLKTLGFALS 318
              R+ LH+R + LP  AG   +   AP P H +  LK  G++ S
Sbjct: 183 --DRLMLHSRRIVLPFHAGKPPIAAEAPVPEHMLSVLKGCGWSES 225