Pairwise Alignments

Query, 330 a.a., Pseudouridine synthase, RluD (NCBI) from Rhodospirillum rubrum S1H

Subject, 315 a.a., pseudouridine synthase, RluA family from Enterobacter asburiae PDN3

 Score =  168 bits (426), Expect = 1e-46
 Identities = 115/320 (35%), Positives = 169/320 (52%), Gaps = 21/320 (6%)

Query: 2   SVETVAVTQDEDGSRLDRWFKRRYPALTHGRLEKLLRTGQIRVDGKRVKSGERLEAGQQV 61
           +V+ VA+ +D+ G R+D + + +   +    + ++LR G++RV+ KRVK   +LEAG +V
Sbjct: 7   AVKMVAIAEDDAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRVKPEYKLEAGDEV 66

Query: 62  RVPPLG-----DEAPSPSSSGHAVPRPAAEGEIRALRRAILHEDAHLIVINKEAGLAVQG 116
           R+PP+      +E  SP              ++ AL   IL+ED H++V+NK +G AV G
Sbjct: 67  RIPPVRVAEREEETVSPKLQ-----------KVAALSDVILYEDDHILVLNKPSGTAVHG 115

Query: 117 GTGTPHHLDGMLESLADGGETPRLVHRLDKDTSGVLVLARTQAAARALTSAFRSREALKV 176
           G+G    +   L +L        LVHRLD+DTSGVL++A+ ++A R+L    R +   K 
Sbjct: 116 GSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKD 175

Query: 177 YWAIVVGRPPMLQGTIKGALAKVAGGRGERMEINEEEGKRAVTDFRVVDQAAKACAWVEL 236
           Y A+V G+       ++  L K     GER+    +EGK + T F+ V++  +    V  
Sbjct: 176 YLALVRGQWQSHVKVVQAPLLKNILQSGERIVRVSQEGKPSETRFK-VEERYEFATLVRC 234

Query: 237 HPRTGRTHQLRVHCLEMGTPILGDGKYGGP--GAFLEGTELPKRMHLHARALALPHP-AG 293
            P TGRTHQ+RVH    G PI  D +YG       L GT L  R+ LHA AL   HP  G
Sbjct: 235 SPVTGRTHQIRVHTQFAGHPIAFDDRYGDREFDKQLAGTGL-SRLFLHAAALKFTHPNTG 293

Query: 294 GVLEIIAPPPPHFVESLKTL 313
            V+ I AP        LK L
Sbjct: 294 EVIRIEAPLDEQLKRCLKVL 313