Pairwise Alignments

Query, 248 a.a., Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 182 a.a., DNA-binding transcriptional repressor PuuR-putrescine from Pseudomonas putida KT2440

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 5/166 (3%)

Query: 68  VGENLRRLRTGRGLSLDRLAKLSGVSRAMLGQIELGRSAPTITVLWKIARALD---VPFS 124
           VGE L+ +R  +GLS   LAK +GV+ + +  IE    +P+I+ L K+   +    V F 
Sbjct: 3   VGERLQAIRKLKGLSQRELAKRAGVTNSTISMIEKNSVSPSISSLRKVLSGIPMSMVEFF 62

Query: 125 AFVAAPALSKAVVLRRSEASWLTSTDGRFSSRALFPFDAPRRVEFYEVVLSGHSIAQSHP 184
           +    P     +V +  E   +  +DG  + + +      R + F   V    +   +  
Sbjct: 63  SVELEPQSPTQIVYKAHEL--IDISDGAVTMKLVGKSHPNRAIAFLTEVYPPGADTGAEM 120

Query: 185 HPAGTVETLTVARGVLEVDSGPRIHRLDPGDALQFEADIDHAYRNP 230
                 ET  +  G LE+  G  I  L+ GD+  FE+   H +RNP
Sbjct: 121 LTHDGEETGILLEGRLELVVGNEIFVLEEGDSYYFESTRPHRFRNP 166