Pairwise Alignments

Query, 678 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  316 bits (809), Expect = 4e-90
 Identities = 176/441 (39%), Positives = 256/441 (58%), Gaps = 13/441 (2%)

Query: 234  LGRLAEVQGELRLLATRDPLTDLPNRSLILEMMDATINRVALDGGRCAVMFLDLDMFKHV 293
            + +L   Q ++R LA  DPLT+LPNR+L+++ +   I  +     R A++FLDLD FKH+
Sbjct: 647  VSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHI 706

Query: 294  NDSLGHEAGDLILKDIGRRFDAVVAGLGAVGRLGGDEFVVLI-----DRYEREDDLARIA 348
            NDSLGH  GD +LK I  R +A V     V RLGGDEFVVL+      R   E+ +  +A
Sbjct: 707  NDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELA 766

Query: 349  RRLITTVKRPIEVDGTLVHSSTSVGIACYPVDGATPQGLLRNADTAMYAVKASGPGQWAF 408
              L   +  P+ +DG  +  + S+G+A  P  G TP  LL+ AD A+Y  K SG      
Sbjct: 767  DTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNTTQL 826

Query: 409  FDRSMTENALVRLRTEASLRSAIEKGQFVLHYQPKLDLRSNRISGCEALIRW-DLNGDLV 467
            F  +M + A  RLR E  LR A+ +G+  LH+QP++D R NRI G E L+RW        
Sbjct: 827  FHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQQ 886

Query: 468  PPGRFISIAEETGMIYDIGLWVLREACQAQRRWRR----HAGAVPIAINVSVRQLKDERF 523
            PP +FI + EE+G+I ++G W+L EAC A  R        A    + +N+S RQ +   F
Sbjct: 887  PPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQNDF 946

Query: 524  IDDFLDIIQASGADPELLEVEVTESALMSSIEVSAHLLREMRSHGVRLSIDDFGTGYSSL 583
            +   L  +       ++L +E+TE  ++ ++E +   + E++ +GV  ++DDFGTGYSSL
Sbjct: 947  VGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSSL 1006

Query: 584  AYLKNLPIDILKIDRSFVSDL---PEESSIPRMIIGLAGQMGLRTVAEGIETEGQLAWLR 640
             YLK LP+D LKID+SFV D    P ++ I R I+ +A  + L  +AEG+E   QLA+L 
Sbjct: 1007 TYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFLE 1066

Query: 641  DNGCDMIQGFLIEKPLPEADF 661
              GC + QG+L  +PLP  +F
Sbjct: 1067 RLGCHLYQGYLHSRPLPLPEF 1087