Pairwise Alignments

Query, 678 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  330 bits (846), Expect = 3e-94
 Identities = 179/424 (42%), Positives = 258/424 (60%), Gaps = 9/424 (2%)

Query: 247  LATRDPLTDLPNRSLILEMMDATINRVALDGGRCAVMFLDLDMFKHVNDSLGHEAGDLIL 306
            LA  D LT LPNR+L  + +   + +         +MFLDLD FK +NDSLGH AGD +L
Sbjct: 840  LAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRML 899

Query: 307  KDIGRRFDAVVAGLGAVGRLGGDEFVVLID-RYEREDDLAR---IARRLITTVKRPIEVD 362
            KD+  R  A V     V R+GGDEF +L+  R  RE  L R   +A  ++ ++ RP  ++
Sbjct: 900  KDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLE 959

Query: 363  GTLVHSSTSVGIACYPVDGATPQGLLRNADTAMYAVKASGPGQWAFFDRSMTENALVRLR 422
                  + S+GIA  P DG+    L++NADTAMY  K  G   + F+   M  +AL RL 
Sbjct: 960  NREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLE 1019

Query: 423  TEASLRSAIEKGQFVLHYQPKLDLRSNRISGCEALIRW-DLNGDLVPPGRFISIAEETGM 481
             E+ LR A+E+ +F+L+YQP+      R++G EAL+RW      LVPPG FI + EE G+
Sbjct: 1020 LESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGL 1079

Query: 482  IYDIGLWVLREACQAQRRWRRHAGAVP-IAINVSVRQLKDERFIDDFLDIIQASGADPEL 540
            + D+G WVLREA +  + W +    VP +++N+S RQ  D +      +I++ SG  P  
Sbjct: 1080 VVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEESGLPPAC 1139

Query: 541  LEVEVTESALMSSIEVSAHLLREMRSHGVRLSIDDFGTGYSSLAYLKNLPIDILKIDRSF 600
            LE+E+TES LM  +  +  +L  +++ G+ +++DDFGTGYSSL YLK  PID+LKIDR+F
Sbjct: 1140 LELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTF 1199

Query: 601  VSDLPE---ESSIPRMIIGLAGQMGLRTVAEGIETEGQLAWLRDNGCDMIQGFLIEKPLP 657
            V  LPE   ++ I R II +A  + L  +AEG+ET  QL +LR++GCD +QG+L  +P+P
Sbjct: 1200 VDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMP 1259

Query: 658  EADF 661
               F
Sbjct: 1260 AHQF 1263