Pairwise Alignments

Query, 582 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

Subject, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  122 bits (307), Expect = 3e-32
 Identities = 74/167 (44%), Positives = 104/167 (62%), Gaps = 2/167 (1%)

Query: 405 KARAEREARVDYLTGVLNRRSFFELAEGELARSIRFGRPLAVLMIDIDYFKAVNDTWGHG 464
           +A  E  A +D LTG+ NRRSF  LA   L  + R   PL  L+ID+D+FKA+ND  GH 
Sbjct: 322 QASTEALATLDSLTGLYNRRSFDLLAAQALREARRDSSPLVALLIDLDHFKALNDNHGHL 381

Query: 465 VGDEVLQNVAGLIGQTLRGADIFGRTGGEEFTAVIVEASGSEALEVAQRLCAVVAQGKIV 524
            GDEVL+  A ++  +LR +DI  R GGEEF  ++ EA G +A+EVA+++     Q    
Sbjct: 382 AGDEVLRQFANVLQGSLRQSDILCRWGGEEFIVLLREAEGRQAIEVAEKIRRRTEQ-LTF 440

Query: 525 GPGGEAIGVTLSIGVSLLRGRDMAFEILSREADQAMYGAKRAGRNRV 571
               + + +T SIG+S L+  D    +L+R AD+A+Y AK+AGRNRV
Sbjct: 441 SYDNQPLRLTTSIGLSSLQPGDTLHALLTR-ADRALYRAKQAGRNRV 486