Pairwise Alignments

Query, 569 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

Subject, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  122 bits (306), Expect = 3e-32
 Identities = 81/217 (37%), Positives = 113/217 (52%), Gaps = 9/217 (4%)

Query: 348 SLIVDGFVVGVF-FAWLVHGRSQYGRRETERQLHMIRQAYEVEQERKRQAEWEARTDFLT 406
           S +  G  + V  FAW V   +Q         L    +     Q   R A   + TD LT
Sbjct: 163 STLQQGIALAVLVFAWFVVSATQ----SLSSALTTAWRLKHEMQRAHRLAMVASCTDELT 218

Query: 407 GLLNRRSFVDLAERELARSLRYQRPFTLLMIDVDHFKAVNDTRGHLVGDVVLQNVARRIK 466
           GL NRR+F D A  +  R         +LM+DVDHFK +NDT GH  GD VLQ +   I 
Sbjct: 219 GLNNRRAFFDNASAQHVRCRDAGTFMAVLMLDVDHFKQINDTFGHAAGDQVLQRIGAAIS 278

Query: 467 ETLRLIDIFGRTGGEEFAAVIVETGGPEALEIARRLCAVVARDEIVQPEGEPIGVTISIG 526
            +LR  DI GR GGEEFA ++  T    A+E+A RL A++A+  +     +   VT SIG
Sbjct: 279 ASLRDNDIAGRLGGEEFAILLPNTPPDTAIEVAERLRALIAKLRV----NDEHPVTASIG 334

Query: 527 LTRSNGRSISFSALMNEADQALYAAKRAGRNQVVISQ 563
           L  +   +    AL++ AD A+Y +K +GRN+V +++
Sbjct: 335 LAFAKAPATELGALLSSADSAMYLSKVSGRNRVTVAE 371