Pairwise Alignments

Query, 569 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

Subject, 342 a.a., putative sensory box/GGDEF family protein from Pseudomonas putida KT2440

 Score =  111 bits (277), Expect = 5e-29
 Identities = 69/172 (40%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 393 KRQAEWE----ARTDFLTGLLNRRSFVDLAERELARSLRYQRPFTLLMIDVDHFKAVNDT 448
           K+Q E E    A TD LT   NRR F + A++    +     P   L++D+D FK +ND+
Sbjct: 170 KKQLEGELQRLATTDVLTQSSNRRHFFECAQQAFDSAREDGTPLAFLLLDIDDFKRINDS 229

Query: 449 RGHLVGDVVLQNVARRIKETLRLIDIFGRTGGEEFAAVIVETGGPEALEIARRLCAVVAR 508
            GH  GD VLQ++A   K  LR  D+FGR GGEEFAAV        A +IA RL   +  
Sbjct: 230 YGHQEGDQVLQHIADSGKAVLRRGDLFGRIGGEEFAAVFPGCTAQIAEQIAERLQRQIQH 289

Query: 509 DEIVQPEGEPIGVTISIGLTRSNGRSISFSALMNEADQALYAAKRAGRNQVV 560
                 + +  GVT+S GLT      ++  +L   AD A+Y AKR G+NQ+V
Sbjct: 290 LSFSHGQ-QTYGVTVSQGLTGLTDEDVALDSLYARADAAMYQAKRQGKNQIV 340