Pairwise Alignments

Query, 193 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 196 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 61.6 bits (148), Expect = 9e-15
 Identities = 39/167 (23%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 25  LVRDNDREAFRTLVTRHIDRVVGVARRVV-GPTEAEDIAQDVFLKLWTNRDQWQPGAGSF 83
           +V++ND + F  L  R+ + V       V    EA+D+  D+F+KL+    +++ G   F
Sbjct: 26  VVKNNDSKLFGILYDRYSNIVYNKCLSFVKSKDEAQDLTHDIFIKLFFQLKKFK-GDAKF 84

Query: 84  RTWLYRVVTNRCIDHTRKRTAIPIDDAPEIPDDARGPLENCHASE----TADRVRQALRF 139
            TWLY    N C+++ +++     +    + D    P E    SE     A+R++++L+ 
Sbjct: 85  STWLYSFTYNFCVNYVQRKYQKKKETFQRLDDLQHHPYEEIDDSEIYKMQAERLQRSLQS 144

Query: 140 LSEPQRMAITLYYNEDLTAAEVATVMDLSLNAVESLLKRGRHKLREL 186
           L    +M + + Y + ++  E+   + +  +AV+  + R + +L ++
Sbjct: 145 LDPNDKMVLLMKYMDGMSHKEIQQSIGVGESAVKMRINRAKQRLLDI 191